Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03162 ATGGCTTCTCGGAGCTTCTTCTTCCTCCTCATCACTATTCTTCTTCTAAGTTCAGTGTCATCCACTGAATTTGTGTATAACAGAGATTTCAATTCCACCAACATCGTCCTCTCCGGCAATGCCACCATCCAAAGCTCTGTTCTCACTCTTACCAACCAGACCTTCTTCTCCATTGGACGCGCCTTTTACCCTCACAAAATACCCATCAAATCTCCCAAATCTTCCACCCCTCTTCCCTTTGCAACCTCCTTCATCTTCTCCATTGCTCCCTGTAAAGGCTTCCCCACTGCTCATGGCTTCGCTTTTGTGCTCTCACCTGTAATGGCCATCTCTAGGGCAACATCAGGAAACTATCTGGGTCTTTTCAATCGCACCAACGACGGTGATCCCTCCAACCATATTTTTGCTATTGAGTTTGATGATTTTAGAAACGAAGAATTTAATGAGAAAAATGATAATCAAGTGGGTGTTGATTTGAATTCGCTTATTTCCAAGTATTCCGATACTGCTGGGTTCTGGAATGGAGATCAATTGGAGGAGTTGAAACTGGACAGTGGGGAGAACTATCAAGTGTGGATTGAGTTTCAGGATTTGCAGCTTAATGTTACTATGGCCCCAGCAGGAAAACCAAAGCCTCAAAAGCCCTTGATTAGTGAGCATGTTAACGTTTCTGATGTCCTGTTGAATGAAATGTATATTGGGTTCTCTGGAGCAACAGGACGAATGGTAGACATATGTAGAATCTTAGCTTGGAGTTTTAGCAATTCCAACTTTTCAATTGGCGATGCTTTGCTTACAAGAAATTTGCCCTATTATTTGCATACAAAGGAACTGATGGTTAGATCAAAAGGGTTCATTGCAGGAGCTACTTTGGGGTCCCTGCTTGTCATTTGCAGCTGCACTTTTGTGGTCTTGAGTTTATGTAAAACAAGAAAAAGAGGGAAAGAGGATGAAGAGAAGAACATTGAAGATTGGGAATTGGAGTATTGGCCACATAGGATTAGCTACCAAGATATTCATGATGCTACAAGGGGATTCTCTGAAGAAAATGTGATTGGGACTGGAACAAGTGGGACAGTATTTAAAGGAGATCTGCAAGGAGTACAAGTGGCAGTGAAGAGAATCCATCATGACACCCAGTACGGGATGAGAGAATTTCTGGCTGAGATATCAAGCCTAGGCAGGATGAAACACAGGAATTTAGTGGGTTTCAGAGGCTGGTGTAAAACAAAAAGAGGAAACTTGATTCTGGTTTATGATTACATGGAGAATGGGAGCTTGGACAAGAGGATTTATGAGTGTGAAGATAGGAGCATGCTGCTTAGCTGGGAACAACGTAGAAGTATTTTACAAAACGTAGCTAGTGGCATTTTATACCTACATGAAGGATGGGAAGTTGGGGTCTTACACAGAGACATCAAATCAGGCAACGTGCTGCTTGATAAAGATATGAATGCTAGATTGGGTGATTTTGGGCTAGCCAGATTGCATCACCAGGAACAACTGGCTGACACAACAAGAGTGATAGGAACTCTGGGGTATATGGCACCAGAACTAGTTAGAATCGGGCGACCATCAAAATCAACTGATGTGTATAGCTTTGGAATTCTGGTTTTAGAAGTGCTTTGTGGGAGAAGACCTTGTGTAGCAGATAAGCCAGCATTGGTTGAGTGGGTTAGGGGCCTAATGGAGAGTGGTAACCTGTGTAGTGCTCTTGATGAAAGTTTGAAGGCTCAAGGTGGGTTCAATGTTGGGAAAGTTGAGAGACTGTTTCATCTGGGTTTGATTTGTTCAAGTGTAGAGCCTGAAGTTAGACCAACAATGAGACAGGTGATGAAAGCGTTGGAGAAAATTGGCGGCGCTGAGTGTGATGAAGAGTGTTTTGATGTGAACTTGCTCGAGAAAATAAACTCAGCAGCAATGTGGTCCAGGCCTTCTTCAAATTCTACAGAAAAGAGTTATCCAACTTTTGAGGAAATTATGCACTCCAAGTATTATAGCACAACCACTATTAGCGGTTCTTATTGTTCCCTCCCACCATCAGAAGAAGCCAACGTCTCAGGAGGAAGCGTTTAG 2076 0.4287 MASRSFFFLLITILLLSSVSSTEFVYNRDFNSTNIVLSGNATIQSSVLTLTNQTFFSIGRAFYPHKIPIKSPKSSTPLPFATSFIFSIAPCKGFPTAHGFAFVLSPVMAISRATSGNYLGLFNRTNDGDPSNHIFAIEFDDFRNEEFNEKNDNQVGVDLNSLISKYSDTAGFWNGDQLEELKLDSGENYQVWIEFQDLQLNVTMAPAGKPKPQKPLISEHVNVSDVLLNEMYIGFSGATGRMVDICRILAWSFSNSNFSIGDALLTRNLPYYLHTKELMVRSKGFIAGATLGSLLVICSCTFVVLSLCKTRKRGKEDEEKNIEDWELEYWPHRISYQDIHDATRGFSEENVIGTGTSGTVFKGDLQGVQVAVKRIHHDTQYGMREFLAEISSLGRMKHRNLVGFRGWCKTKRGNLILVYDYMENGSLDKRIYECEDRSMLLSWEQRRSILQNVASGILYLHEGWEVGVLHRDIKSGNVLLDKDMNARLGDFGLARLHHQEQLADTTRVIGTLGYMAPELVRIGRPSKSTDVYSFGILVLEVLCGRRPCVADKPALVEWVRGLMESGNLCSALDESLKAQGGFNVGKVERLFHLGLICSSVEPEVRPTMRQVMKALEKIGGAECDEECFDVNLLEKINSAAMWSRPSSNSTEKSYPTFEEIMHSKYYSTTTISGSYCSLPPSEEANVSGGSV 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03162 691 FunFam L-type lectin-domain containing receptor kinase S.4 422 626 - -
Accr1g03162 691 SUPERFAMILY Protein kinase-like (PK-like) 322 616 IPR011009 -
Accr1g03162 691 Pfam Legume lectin domain 22 257 IPR001220 GO:0030246
Accr1g03162 691 SMART serkin_6 346 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03162 691 Pfam Protein kinase domain 347 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03162 691 PANTHER - 38 617 - -
Accr1g03162 691 ProSitePatterns Protein kinases ATP-binding region signature. 352 373 IPR017441 GO:0005524
Accr1g03162 691 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 307 421 - -
Accr1g03162 691 ProSitePatterns Serine/Threonine protein kinases active-site signature. 468 480 IPR008271 GO:0004672|GO:0006468
Accr1g03162 691 Gene3D Transferase(Phosphotransferase) domain 1 422 627 - -
Accr1g03162 691 ProSiteProfiles Protein kinase domain profile. 346 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03162 691 Gene3D Phosphorylase Kinase; domain 1 306 421 - -
Accr1g03162 691 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 258 IPR013320 -
Accr1g03162 691 CDD lectin_legume_LecRK_Arcelin_ConA 22 256 IPR001220 GO:0030246
Accr1g03162 691 Gene3D - 20 260 - -
Accr1g03162 691 FunFam L-type lectin-domain containing receptor kinase V.9 20 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03162 Accr-Chr1 68433044 68435716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03162 19 571 Receptor kinase-like Gene Family AT4G04960 53.274 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr1g03162 Pkinase 1.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03162 - - vum:124844866 920.998