Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03151 ATGTCACTGCGCGCTTTCAAGGAGACTCTCAAGCCTTGCACAAGCCAACCGTCTTCTACATCGGTTAGCCAAAAGCAGTCTTCGATTCTCCAAGATTCCGACCCCATAATCCCTAGAAAACCCCCAAAGTCCTCTCTCACCCAGCAGCTTCGTCGCCTGCAAGACCCACTTGCTCCTCCGCTTATTCAGCCGCACAATTCACCTAAGCGAGAAAGGGAACAGAAAATTAGTGACTTCGTGGATGAGGAAGAAGAAGAGGACGAGGAGGAGGAGCCAGAATTGAAGAGGCCAAAATTCGGTGTAGCTAAATTGAGTCAGTTTCAGTACGATCATACTGGACCCTTTGAGCCCCTGGTCTTGTCTTCGGATGGAGAAGTTCCGGTGGTACAGGTTCCTGCATCTATCAACTGCAGACTTCTTGAACATCAAAGAGCAGGAGTGAAGTTTCTGTATAGTTTGTATAAAAACAATCATGGTGGCATTCTTGGGGATGACATGGGTCTTGGGAAGACCATTCAAACAATAGCATTTCTTGCTGCTGTGTTTGGTAAAGATGGAGAATATATGTCAAAGGAAAACCAAGCAATGAAAAAAGATCCCGTGTTAATAATTTGCCCAACTTCTGTTATCCACAACTGGGAGAGTGAATTCTCTAAATGGGCAAACTTTAGAGTTTCCATTTATCATGGTTCTAACCGGGATCTAATATATGATAAACTGGAAGCACATAGAGTGGAGGTACTTATTACTAGTTTTGACACATACAGAATTCATGGTAGCATCTTGTCAGAAATCAAATGGGACATTGTGGTTATTGATGAGGCTCATCGGCTCAAGAATGAGAAATCAAAACTCTACAGAGCCTGTTTAGAAATAAAAACCCAAAGACGTTTTGGTCTTACTGGCACAATCATGCAAAATAAGATCATGGAACTGTTTAATCTCTTGGACTGGGTTGTTCCAGGATCCCTGGGAACACGTGAACACTTTCGAGATTTCTATGATGAACCCCTGAAGCATGGTCAGAGGTCAACTGCTCCAAAGAGGTTTGTTGAGATTGCCAATAAGCGGAAACAGCACCTTATGACAGTTCTTCAGAAATATATGTTAAGAAGGATGAAGGAAGAGACCATTGGCCATCTTATGATGGGAAAGGAAGATAATGTCGTGTTCTGTGCCATGAGTGAATTACAAAAACGGGCATATAGGAGAATGTTACAACTTCCTGATATCCAATGCCTTATTAATAAGGATTTGCCTTGTAGTTGTGGAAGCCCACTCACACAAGTTGAATGTTGTAAGAGGATTGTACCAAACGGAATCATTTGGCCTTACCTTCACAGAGATAACCCTGATGGTTGTGATTCATGCCCCTTTTGCCTTGTCCTCCCTTGCCTTGTGAAGCTCCAACAGATAAGCAATCACCTTGAGCTGATCAAGCCAAACCCCAAAGATGACCCAGACAAACAAAAAAAAGATGCAGAGTTTGCTGCTGCTGTCTTTGGCCCTGATATTGATTTGGTGGGTGGGAACATGCAGAGTGAGAGTTTTATGGGTCTAAGTGATGTGAAACATTGTGGAAAAATGAGAGCAATTGAAAAGCTTTTGTTTTCATGGATCTCTCAGGGTGATAAAATTCTTTTGTTTAGCTATTCTGTAAGAATGCTTGACATACTGGAGAAATTTCTTATAAGAAAAGGCTACTGCTTCTCAAGACTTGATGGATCTACTCCAACAAATTTACGCCAGTCTCTGGTTGATGACTTCAACTCAAGTCCAAGCAAACAAGTATTCTTGATATCAACTCGAGCTGGCGGGCTTGGATTGAACCTTGTCAGTGCGAATCGTGTGGTGGTATTTGATCCCAACTGGAATCCCGCGCAAGACTTACAGGCACAGGACAGGTCATTCCGATTTGGGCAGAAGCGACATGTTGTGGTATTTCGACTTCTTGCAGCTGGTTCACTCGAAGAGCTTGTTTATTCTCGTCAGATCTACAAGCAGCAACTATCAAACATCGCTGTCTCTGGAAAAATGGAAAAGCGTTATTTTGAAGGTGTCCAGGACTGCAAGGAATTTCAAGGGGAACTTTTTGGAATTTCCAATTTGTTTCGAGATTTATCCGACAAGCTTTTTACAAGTGAAATAATTCATGTGCATGATAAGGAAGGAAAAGAACATGAGCGTAGAATAGAACCGGGAGATGATATATTAGTATCAGAGTCTGGGAACAGGTTATCAAACAATTATAAGAGGACTTCAACGAGTGAAGCAGAACTGGAAGATCTTGGCATTGTCTATGCTCATCGGAATGAAGACATAGTCAACCTTGGTCCTGGTATTCAAGAGAAGACAGAGACCACCATCTATCACAGTGAAAGCCAAGCCATGCCCCTTGTCAAGAGAGAAGAACCAGAGCGTGTAGTTAAAAAACAGAAAATTCCTATCATCAATGAGAGGAAGAGAGCCCAATATAGGCTGCTCGCTCGGTCTAGAGGCATGGGAGAGCTTGAATTTAGCATGTGGTTATTGTCAGCGACTCCAATGCAAAGAGAGCAAGTGCTTCAAGACTATAGGAGGAAGATACCTTGA 2592 0.4259 MSLRAFKETLKPCTSQPSSTSVSQKQSSILQDSDPIIPRKPPKSSLTQQLRRLQDPLAPPLIQPHNSPKREREQKISDFVDEEEEEDEEEEPELKRPKFGVAKLSQFQYDHTGPFEPLVLSSDGEVPVVQVPASINCRLLEHQRAGVKFLYSLYKNNHGGILGDDMGLGKTIQTIAFLAAVFGKDGEYMSKENQAMKKDPVLIICPTSVIHNWESEFSKWANFRVSIYHGSNRDLIYDKLEAHRVEVLITSFDTYRIHGSILSEIKWDIVVIDEAHRLKNEKSKLYRACLEIKTQRRFGLTGTIMQNKIMELFNLLDWVVPGSLGTREHFRDFYDEPLKHGQRSTAPKRFVEIANKRKQHLMTVLQKYMLRRMKEETIGHLMMGKEDNVVFCAMSELQKRAYRRMLQLPDIQCLINKDLPCSCGSPLTQVECCKRIVPNGIIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPKDDPDKQKKDAEFAAAVFGPDIDLVGGNMQSESFMGLSDVKHCGKMRAIEKLLFSWISQGDKILLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVVFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQIYKQQLSNIAVSGKMEKRYFEGVQDCKEFQGELFGISNLFRDLSDKLFTSEIIHVHDKEGKEHERRIEPGDDILVSESGNRLSNNYKRTSTSEAELEDLGIVYAHRNEDIVNLGPGIQEKTETTIYHSESQAMPLVKREEPERVVKKQKIPIINERKRAQYRLLARSRGMGELEFSMWLLSATPMQREQVLQDYRRKIP 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03151 863 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 531 684 IPR001650 -
Accr1g03151 863 PANTHER SNF2/RAD54 FAMILY MEMBER 16 798 - -
Accr1g03151 863 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 151 322 IPR014001 -
Accr1g03151 863 MobiDBLite consensus disorder prediction 1 96 - -
Accr1g03151 863 Pfam Helicase conserved C-terminal domain 528 640 IPR001650 -
Accr1g03151 863 SMART helicmild6 557 640 IPR001650 -
Accr1g03151 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 129 372 IPR027417 -
Accr1g03151 863 FunFam Switch 2 121 371 - -
Accr1g03151 863 Gene3D - 384 729 IPR027417 -
Accr1g03151 863 CDD SF2_C_SNF 522 651 - -
Accr1g03151 863 Gene3D - 117 371 IPR038718 -
Accr1g03151 863 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 693 IPR027417 -
Accr1g03151 863 Pfam SNF2-related domain 154 412 IPR000330 GO:0005524|GO:0140658
Accr1g03151 863 SMART ultradead3 135 330 IPR014001 -
Accr1g03151 863 MobiDBLite consensus disorder prediction 9 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03151 Accr-Chr1 68280383 68291757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03151 529 670 RAD5 or RAD16-like Gene Family AT5G43530 38.732 2.90e-22 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Accr1g03151 SNF2_N 9.7e-57 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03151 K20098 - gmx:100781003 1326.23