Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03147 ATGGTTGCCCCTGAAAAATTGAACTTTCGGTTGTTTAAGAGGAAGGGACTAGGGTTTATATTCCAGATTTTGTATATGTGGTGGGTTGTTCTACTATTCCTTCGACCTGTGGCGGGTCTGAGACCATTAAGAGAAGGAATTCGGTCATGGAGCGATGAGTGGCTATTTTCAACAAAAGATGAAAGTGATCAATTTTCACAATGGAACATAACAGGAACTTACAAAGGGACATGGAACTTTTTAGGTTCTGCAAATGGCTCTTCAAGATTTTCAGACATCAGAAAAACAAATGGCAATTCTGTAATTGAGTTATTTAGTACGCCCACAAAAATAACTGGTGTGCATTATGTTCAGGGGGTGATTATATTCCATGATGTGTTTGACAGTGAGTACAATGTTGGTGGTGCTCAAATCAGAGTGGAAGGTGTGTATATATGGCCTTTTAAACAGCTTCGAATGGTAGCTAACAGTGGAAAAGAGGGAAATTCATATCAGGATGAAGATTATCTCTTATCTAATCCATATCATCTGCTTGGATTGTTCTCATCTCAGGTATTCCAAGAATCCTCACGAGATAAGACAAGGAGAAGAACACACTCTCCAATATATGACATGGAGAAACATTGTAATATTGAAATTGCAGCACAGTTTTCACGCGGATCATCATCAAAAAATGATGGGGATCATGATCGATTCCACCTAGAAGGGTTGATGGAGAGTCCCTCGGTGGATGATGATGGGGATTGCTTCTCACCTTTAATGTTAAATGCAACTTCTGTTAACATTGAGGTCTACTATAACAAAGCAGTGAACTTCACCTTGATGGTCACCTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAAATGGAACATAGCAACACTCAATCTGGGGCTGCTAAGGTTTCAAAAATAATGATTGGCCAACAGGCTATAATGGATGCTTATCTTTGCCTTTTACATCTGACTGCAGGAATAATAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCTGCCTTTTTCAAGTTTGTGGTCTTCTCGATATTTGAGATGAGATATCTTCTTGCAATATGGAAGGCAAATAGGCCTTTGAGTAATGGGGAAGGCTGGGAGACAATGAGGCGTGAACTTTCATCTTTATACATTCGTTTCTATGGGATCCTGGTGGGAGGAATTCTGCTCATGTACCAGTTCCATAATTATTTGAGACCTATACTTCTTCTCATGTACTCATTTTGGATACCTCAGATAATTACCAATGTTATTCGTGATTCCCGCAAACCGTTACATCCCCATTATATCTTAGGGATAACTGTCACGCGCCTGGCAGTGCCATTATATACATTTGGTTGCCCAAAAAACTTCATGCGCATTGAACCAGTCAAGAGCTGGTGTTTGTGTCTGACTGCATTTATTGGAATTCAGGCTGCAATTCTTCTGATTCAGAACTATCTTGGGTCCCGCTGTTTCATTCCTCGTCAGATTCTGCCCGAGAAATACAGCTACTACAGAAGGTTTGGTCAAAATACAAATCATGCGACAGATTGTGTTATTTGCATGACGGCTATTGATCTTTCTCAGCGACCAAATGATTGCATGGTGACACCTTGTGAGCATTTTTTCCACTCTGGTTGTTTACAAAGATGGATGGATATAAAGATGGAGTGCCCGACATGCCGGCGCCCTCTGCCACCTGCTTAG 1704 0.4055 MVAPEKLNFRLFKRKGLGFIFQILYMWWVVLLFLRPVAGLRPLREGIRSWSDEWLFSTKDESDQFSQWNITGTYKGTWNFLGSANGSSRFSDIRKTNGNSVIELFSTPTKITGVHYVQGVIIFHDVFDSEYNVGGAQIRVEGVYIWPFKQLRMVANSGKEGNSYQDEDYLLSNPYHLLGLFSSQVFQESSRDKTRRRTHSPIYDMEKHCNIEIAAQFSRGSSSKNDGDHDRFHLEGLMESPSVDDDGDCFSPLMLNATSVNIEVYYNKAVNFTLMVTFISFLQVLLLIRQMEHSNTQSGAAKVSKIMIGQQAIMDAYLCLLHLTAGIIVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNGEGWETMRRELSSLYIRFYGILVGGILLMYQFHNYLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYILGITVTRLAVPLYTFGCPKNFMRIEPVKSWCLCLTAFIGIQAAILLIQNYLGSRCFIPRQILPEKYSYYRRFGQNTNHATDCVICMTAIDLSQRPNDCMVTPCEHFFHSGCLQRWMDIKMECPTCRRPLPPA 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03147 567 PANTHER RING ZINC FINGER PROTEIN 118 566 - -
Accr1g03147 567 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 505 567 IPR013083 -
Accr1g03147 567 CDD RING-H2_TUL1-like 511 566 - -
Accr1g03147 567 SUPERFAMILY RING/U-box 516 566 - -
Accr1g03147 567 SMART ringv_2 516 561 IPR011016 GO:0008270
Accr1g03147 567 ProSiteProfiles Zinc finger RING-type profile. 517 561 IPR001841 -
Accr1g03147 567 Pfam Ring finger domain 516 561 IPR001841 -
Accr1g03147 567 SMART ring_2 517 560 IPR001841 -
Accr1g03147 567 FunFam E3 ubiquitin-protein ligase, putative 503 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03147 Accr-Chr1 68264475 68272273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03147 517 564 C3H Transcription Factor Family AT4G12190 39.583 7.77e-09 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03147 K23788 - cave:132181383 971.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03147 1 68264475 68272273 Accr1g03147 1 68264475 68272273 ECH