Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03143 ATGACTGGCAAAGAAATCCTCATCAAGATTAAGGCCAAGGCTGGGTTTGGGACATCAGCAGCTGACACAGGAAAAGGAAAAGGCAAAATGTCAAAGCATATCACACATGGCTTTCACTTAATAAAGGGAAAATCAGGCCATGCTATGGAAGATTATCTAGTTTCAGAATTCAAGCAAGAAAAGGACAACGAATTAGGATTGTTTGCTATATTTGATGGCCATTTGGGTCATGACGTTGCAAGCTATTTGCAGAATCACCTTTTTGACAACATCTTGAAACAGCCTGACTTCTGGAATGACCCACAAAGTGCAGTAAGGAACGCTTATCTTGAAACAGACGAGAAAATACTGGAACAAGCACTTGTCTTGGGACGAGGAGGATCAACTGCAGTGACTGCAATACTTATTAATGGTCGAACGCTAGTAGTAGGGAATGTTGGAGACTCTCGAGCTGTAATTTGCAAGAATGGAGAGTCAGAGCAACTATCAGTTGATCATGAGCCAAGCAAGGAAAAAAGGTTGATCGAGAGCCGTGGTGGTTTTGTGTCAAACATTCCAGGGGATGTGCCTCGTGTAGATGGGCAGCTAGCAGTAGCCAGGGCATTTGGTGACAAGAGCTTGAAGATGCATCTAAGTTCAGAACCTGATGTGGTGATAAAGGAGATAGATGATGACACAGAATTCCTTCTTCTAGCAAGTGACGGAATATGGAAGGTAATGTCAAACCAAGAAGCAGTGGAGTGTATCAGACAAATAAAGGATGCTCAGGCGGCAGCGAAGCGCTTGATAGAGGAGGCCGTTGGCCGGAAGAGTAAGGATGACATATCCTGCATTGTTGTGAGGTTCCAATGA 852 0.4401 MTGKEILIKIKAKAGFGTSAADTGKGKGKMSKHITHGFHLIKGKSGHAMEDYLVSEFKQEKDNELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNDPQSAVRNAYLETDEKILEQALVLGRGGSTAVTAILINGRTLVVGNVGDSRAVICKNGESEQLSVDHEPSKEKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVIKEIDDDTEFLLLASDGIWKVMSNQEAVECIRQIKDAQAAAKRLIEEAVGRKSKDDISCIVVRFQ 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03143 283 Gene3D - 30 283 IPR036457 -
Accr1g03143 283 FunFam Probable protein phosphatase 2C 39 25 283 - -
Accr1g03143 283 Pfam Protein phosphatase 2C 47 275 IPR001932 -
Accr1g03143 283 PANTHER PROTEIN PHOSPHATASE 30 282 IPR015655 GO:0004722|GO:0006470
Accr1g03143 283 SMART PP2C_4 30 280 IPR001932 -
Accr1g03143 283 CDD PP2Cc 36 282 IPR001932 -
Accr1g03143 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Accr1g03143 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Accr1g03143 283 SMART PP2C_SIG_2 49 282 IPR001932 -
Accr1g03143 283 Coils Coil 245 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03143 Accr-Chr1 68245392 68247416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03143 24 283 PP2C-type Phosphatase Gene Family AT4G28400 75.000 2.20e-145 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03143 K17506 - cit:102608973 471.855