Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03129 ATGCTCGCGGTGTCACCTCTTGGAAGCACCAGAGATGAAGAAGGGCAAGGAGAGATGGAGATATTTTCGATGGAGTCCCATGAATTCGGCGACCTATCCGATGGGAATTTACTGGAAAGCATCAGCTTCGACGACATCTTTGTCGGTATCAACGACGGAGATGTCTTACCGGATCTGGAGATGGACCCCGAGATCTTCGCCGACTTCTCCCTTAGCGCCGGCGAGGACTCGGAGATGGCCACGTCATCGGTCTCGGTGGAAAACGTCAATAATAAAGTTGATGAGAATATAAGGACGACGTCGACGAAGAAAGAAGAGGAAGATAAAGCGTCCTCGGATTCGGGTTCGAATTCCGGAGAGGAGATAGTGAGCCAAAGGGATGAATCCGTGGAGGTTAAGCCGTCTCAGAAGCAAGGTGACAAGGGAAGAAAATCATCAGCCGAGTCAAAGAATTCTCAAGGCAAGAGAAAAGTGAAGGTGGACTGGACTCCAGAATTGCACAGGCGATTCGTGCAAGCAGTGGAGCAACTAGGAGTGGATAAGGCGGTACCTTCGAGAATATTGGAAATTATGGGAATTGATTGTCTCACTCGCCACAATATAGCCAGCCATCTTCAAAAATACCGATCCCACAGGAAGCATCTGTTGGCACGTGAAGCGGAAGCAGCAAACTGGAGTAAAAGAAGACAGTGTTATGGTACAGGAGGAGGCAAGGGAGAGGGAAGCCCTTGGCTCGCCTTAGCACCACCGACAATTGGTTTCCCTCCGGTGACACCGCCGCCAATGCAGCAATTCAGAGCTCTTCATGTGTGGGGCCATCCCACCATGGACCACTCCTTCATGCCATTGTGGCCTAAGCATCTCCCTCCAAACTCCCCTTCGCCTCCTCCCATCGCCTGGCCGCCACCCACTCCTCGGCCTCCTCATCCTTCTTCCTATTGGCACCAACCCGCTCCCAATGCACTAACGCCAGGAACACCTTGCTTTCCGCAGCCTGGGACGACAACGAGGTTTCCATCTCCGACTGTCCCGGGTATTCCACCCCATGCCATGTACAAAGTAGATCCGGCCATCTCCGTCTCCACCGCCCAACCCACTCCTCGCCCACTCATTGATTCTCATCCGTCAAAGGAGAGTGTAGATGCAGCTATTGGAGATGTTTTATCAAAGCCATGGCTGCCACTTCCTCTTGGGCTTAAAGCTCCAGCGCTTGACAGTGTGATGGGTGAATTACAGAGACAAGGAATTCCGAAAATTCCACCCTCTTGTGTTTGA 1275 0.5208 MLAVSPLGSTRDEEGQGEMEIFSMESHEFGDLSDGNLLESISFDDIFVGINDGDVLPDLEMDPEIFADFSLSAGEDSEMATSSVSVENVNNKVDENIRTTSTKKEEEDKASSDSGSNSGEEIVSQRDESVEVKPSQKQGDKGRKSSAESKNSQGKRKVKVDWTPELHRRFVQAVEQLGVDKAVPSRILEIMGIDCLTRHNIASHLQKYRSHRKHLLAREAEAANWSKRRQCYGTGGGKGEGSPWLALAPPTIGFPPVTPPPMQQFRALHVWGHPTMDHSFMPLWPKHLPPNSPSPPPIAWPPPTPRPPHPSSYWHQPAPNALTPGTPCFPQPGTTTRFPSPTVPGIPPHAMYKVDPAISVSTAQPTPRPLIDSHPSKESVDAAIGDVLSKPWLPLPLGLKAPALDSVMGELQRQGIPKIPPSCV 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03129 424 Gene3D - 154 215 - -
Accr1g03129 424 NCBIfam myb-like DNA-binding domain, SHAQKYF class 157 211 IPR006447 GO:0003677
Accr1g03129 424 MobiDBLite consensus disorder prediction 124 160 - -
Accr1g03129 424 MobiDBLite consensus disorder prediction 78 96 - -
Accr1g03129 424 MobiDBLite consensus disorder prediction 78 160 - -
Accr1g03129 424 MobiDBLite consensus disorder prediction 292 312 - -
Accr1g03129 424 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 154 213 IPR017930 -
Accr1g03129 424 SUPERFAMILY Homeodomain-like 155 214 IPR009057 -
Accr1g03129 424 Pfam Myb-like DNA-binding domain 160 209 IPR001005 -
Accr1g03129 424 MobiDBLite consensus disorder prediction 97 114 - -
Accr1g03129 424 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 423 IPR044825 GO:0003700|GO:0045893
Accr1g03129 424 FunFam Two-component response regulator 153 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03129 Accr-Chr1 68148321 68151276 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03129 1 349 G2-like Transcription Factor Family AT5G44190 41.081 6.03e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr1g03129 Myb_DNA-binding 5.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03129 - - jre:109001455 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03129 1 68148321 68151276 Accr1g03129 1 68148321 68151276 ECH