Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03125 ATGCTTCTGCAACAAAAGATGGATGATGCAGAAATTTCAAGTGGTTTTCCTCCTCATCAGAACCCAACTGATCATCTTGAATCTAGTAATAACAATCCTCCTGTTTTGAAGAGGAAGAGAAACCTCCCAGGAAATCCAGATCCTGAAGCAGAGGTCATAGCCTTATCGCCGAAGACCCTGATGGCCACAAACAGATTCTTGTGTGAAATCTGTGGGAAGGGGTTCCAAAGGGATCAGAATCTTCAGCTGCATAGAAGAGGACACAATCTTCCATGGAAGCTGAAGCAGAGGACAAGCAAAGAACCAAGGAAGAGAGTGTATTTGTGCCCTGAGAAGACATGTGTGCACCATGACCCTTCAAGGGCTCTGGGGGACTTAACAGGGATAAAGAAGCACTTTTGCAGAAAGCATGGAGAGAAGAAGTGGAAGTGCGAGAAGTGCTCAAAGAGATATGCTGTCCAGTCAGACTGGAAAGCCCACTCTAAGACCTGTGGCACCAAAGAATACAAATGTGATTGTGGCACTATCTTTTCACGGAGAGACAGTTTCATAACTCACAGGGCATTCTGCGATGCCTTAGCAGAAGAGACAGCAAGAGTGAATGCAGCATCTACAATGGCCAACTCCTTTCTGGGTTACACCATCATTGGAAACTCCCAAAGGCCTGCTGGCATAAGCATGACCACTCATTTCCCTTCCATTTTCAAGCCAATTTCAAATACTAGTGTTGCTGAAACAAATTATCAAGCACCCAGTGCGCTCTCTCTATGGATGGCCCCAACTCAAACGACGCGAGGTCCTCCTCTAACTCATCACGACACAATGGTCACTAATTTGAACAGTAATAACAATGACATGTTTGAGATTCATCATCAACTGGGATCAGTTACCCCTAGCTCATCATCGTCAGGATCAATACTATACGGGAACAACCCACTTGTGTCATGCCCAAATCCTCAGCTGATGAATTGGGTGTTTGGGAGTGATCAAAATAAGAACTGTAGTGATCATCACCATCATCATCAAGATCAGATGATCAGTGTCCCTTCGTTGTACAGCTCCGAACACCAGCAATCCCATCAAACATCCTCGGCAAACATGTCGGCCACAGCTTTGTTGCAGAAGGCTGCTCAAATCGGGTCAACTTCAACCGACACGTCATTCCTGGGAACCTTCGGGCTGAAATGCCGCAACCTTAGTCAGGAACAAGAAGGGAACAAATTTTGCGGCATCTACGGTACAGGTTCATCGATACTCGTATCTACCCTTGGAAGCGAGACGACAGAGAACCCTGCAAAACGCAGGAATATACAGCACAAAGAAGAGATCAGTAATAACGGAGGAGAGAAGACTAGGGATTTTCTGGGTGTGGGCGTAGAATCCATTTGCCATGATGCTCCAATCAACGGATGGATTTAA 1419 0.4588 MLLQQKMDDAEISSGFPPHQNPTDHLESSNNNPPVLKRKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSKEPRKRVYLCPEKTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYKCDCGTIFSRRDSFITHRAFCDALAEETARVNAASTMANSFLGYTIIGNSQRPAGISMTTHFPSIFKPISNTSVAETNYQAPSALSLWMAPTQTTRGPPLTHHDTMVTNLNSNNNDMFEIHHQLGSVTPSSSSSGSILYGNNPLVSCPNPQLMNWVFGSDQNKNCSDHHHHHQDQMISVPSLYSSEHQQSHQTSSANMSATALLQKAAQIGSTSTDTSFLGTFGLKCRNLSQEQEGNKFCGIYGTGSSILVSTLGSETTENPAKRRNIQHKEEISNNGGEKTRDFLGVGVESICHDAPINGWI 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03125 472 FunFam protein indeterminate-domain 12-like 45 113 - -
Accr1g03125 472 SMART c2h2final6 142 162 IPR013087 -
Accr1g03125 472 SMART c2h2final6 66 88 IPR013087 -
Accr1g03125 472 Gene3D Classic Zinc Finger 62 89 - -
Accr1g03125 472 ProSiteProfiles Zinc finger C2H2 type domain profile. 66 88 IPR013087 -
Accr1g03125 472 ProSitePatterns Zinc finger C2H2 type domain signature. 68 88 IPR013087 -
Accr1g03125 472 MobiDBLite consensus disorder prediction 16 36 - -
Accr1g03125 472 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 26 460 IPR031140 -
Accr1g03125 472 MobiDBLite consensus disorder prediction 1 50 - -
Accr1g03125 472 FunFam protein indeterminate-domain 5, chloroplastic-like 120 199 - -
Accr1g03125 472 Gene3D Classic Zinc Finger 120 200 - -
Accr1g03125 472 SUPERFAMILY beta-beta-alpha zinc fingers 65 162 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03125 Accr-Chr1 68115142 68117281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03125 32 472 IDZ Gene Family AT1G03840 50.299 1.40e-139 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g03125 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03125 K25870 - zju:107417196 547.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03125 1 68115142 68117281 Accr1g03125 1 68115142 68117281 ECH