Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03102 ATGGAACGTTTTGATTGGAGTTCAGGCATTTGTGGAAATGCCTCACAGAAAAGTGGTAGCCATGGTTTCACGGTTAATTCTGGTGTTATAGAAAATGGGTTTGCTTCATCTTCTTCTCTGGTTTTGGATAACCAGATCGGTGAACTCGTGGAAGCTTCTGCCAAAGAACGAAACAAGGGCTTGTCCTCTGAGAGAAGCGTAGCTGCTTTGAAGAACCATAGCGAAGCAGAGCGCAGGAGAAGAGCAAGGATCAATGCTCATCTTGATACACTTCGCACCGCGATTCCAGGAGCTAACAAGATGGACAAAGCATCGTTACTTGCGGAGGTGATCACACATCTGAAAGAGCTAAAAGGGAATGCAGCACAAGCTTGTGAAGGTTTAATGGTACCAAAGGACAGTGATGAGATAAGAGTTGAAGAACAAGAGGGTGGTTCTAATGGTTTTCCTTATTCAATAAGGGCATCTCTGTGTTGTGAGTATAAACCTGGGTTATTGTCTGACATAAGACAAGCAATTGAAGCTCTTCACATGATGATAGTGAAGGCAGAAATTGCGACATTGGGAGGGAGGATGAAAAATGTGTTTGTGATAATAAGCTGCAAAGAGCACAACGACATTGAAGAAGATTCTGAGTATAGACAGTTTCTTGCTGGTTCTGTTCATCAAGCTCTCAAGTCTGTGGTTGATAGATTCTCTGCTTCACAGGACCTCTTAGGAATCAGAAAGAGGAGGAGGATTTCTGTGTTCAATTCATCATCTCTTGCAGAATTCTGGTGA 780 0.4295 MERFDWSSGICGNASQKSGSHGFTVNSGVIENGFASSSSLVLDNQIGELVEASAKERNKGLSSERSVAALKNHSEAERRRRARINAHLDTLRTAIPGANKMDKASLLAEVITHLKELKGNAAQACEGLMVPKDSDEIRVEEQEGGSNGFPYSIRASLCCEYKPGLLSDIRQAIEALHMMIVKAEIATLGGRMKNVFVIISCKEHNDIEEDSEYRQFLAGSVHQALKSVVDRFSASQDLLGIRKRRRISVFNSSSLAEFW 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03102 259 Gene3D - 64 125 IPR036638 GO:0046983
Accr1g03102 259 PANTHER TRANSCRIPTION FACTOR BHLH30 34 252 IPR045847 GO:0003700|GO:0006355
Accr1g03102 259 MobiDBLite consensus disorder prediction 57 78 - -
Accr1g03102 259 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 61 120 IPR036638 GO:0046983
Accr1g03102 259 Pfam Helix-loop-helix DNA-binding domain 72 117 IPR011598 GO:0046983
Accr1g03102 259 SMART finulus 74 123 IPR011598 GO:0046983
Accr1g03102 259 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03102 Accr-Chr1 67930739 67931611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03102 65 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.624 1.42e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g03102 HLH 9e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03102 - - lja:Lj3g3v2848980.1 362.459