Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03088 ATGGACTCCCCGGCGGGACCTCCGTCGCCCCCCTCCACTGCTCCGTCCCGGTCGTCGCCGTTCCCCGGACGGGAAGACTGCTGGAGTGAGGACGCCACCTTCACGCTCATCGATGCATGGGGTGAACGTCACCTTGAGCTCAATCGAGGAAACCTCCGTCAGAAGCACTGGCAAGAAGTCGCCGACGCCGTTAACGCCAATCATGGCCACGTCAAGAAAGCGCGCCGAACCGACGTCCAGTGCAAGAACCGCATCGACACTCTGAAGAAGAAGTACAAGATCGAGAAGAGCAAGGTCATCGATTTCGACGGGAACTACACTAGCCCTTGGCCCTTCTTCAACCGCCTTGACGCTCTCATCGGCGATGCGTTTCCAGTTAAGAGACTTCCGCCGGCAATCGATAGCAGCCGCCGTATCTCCCATCCCGTGAAGTCTCCATCATGGGTAATGTCACAGGTGCCTGTCGGCCCCCGATCCGGCACTCAGAAACGGCCGGCGCCGGCGCCGGCGAGCATGAAAAATTCGTCTTTCCGTCGGAACTTTTCGGCTTTTGCAGAGGCAGCTGCAGCAGCAGCAGCAGCCAAGGTAGGGGATGCAAATAGTGACGATTCGGATGAGTCAAGGTCAAGTAGTGCCCCTGGGAGTAGAAAGAGAGGAAGAGAAAGAGAGAAAAAGAGGGAAAGCGACGAGGATTCAGAATTTGGGTACAGAGAACTGGCACAAGCAATAGAGAGGTTCGGAGAGATATACGAGAGAGTAGAAGCGGCGAAGCAAAGGCAAATGATGGAGTTAGAGAAACAGAGGATGCAATTTGCGAAGGATTTGGAGTTCCAGAGGATGGAGCTTTTCATGGAAATGCAGGTTCAGCTTCAAAAAATCAAGCGCGCCAAGCGATCTTCTCAGGCTGACAGTTTCTAG 918 0.549 MDSPAGPPSPPSTAPSRSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQEVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKSKVIDFDGNYTSPWPFFNRLDALIGDAFPVKRLPPAIDSSRRISHPVKSPSWVMSQVPVGPRSGTQKRPAPAPASMKNSSFRRNFSAFAEAAAAAAAAKVGDANSDDSDESRSSSAPGSRKRGREREKKRESDEDSEFGYRELAQAIERFGEIYERVEAAKQRQMMELEKQRMQFAKDLEFQRMELFMEMQVQLQKIKRAKRSSQADSF 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03088 305 Gene3D - 28 94 - -
Accr1g03088 305 Coils Coil 250 281 - -
Accr1g03088 305 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 8 298 IPR044823 -
Accr1g03088 305 FunFam trihelix transcription factor ASIL2 28 94 - -
Accr1g03088 305 MobiDBLite consensus disorder prediction 1 17 - -
Accr1g03088 305 MobiDBLite consensus disorder prediction 199 233 - -
Accr1g03088 305 MobiDBLite consensus disorder prediction 197 233 - -
Accr1g03088 305 MobiDBLite consensus disorder prediction 136 174 - -
Accr1g03088 305 MobiDBLite consensus disorder prediction 140 158 - -
Accr1g03088 305 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
Accr1g03088 305 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03088 Accr-Chr1 67808280 67811542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03088 23 295 Trihelix Transcription Factor Family AT3G14180 35.294 1.29e-47 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr1g03088 Myb_DNA-bind_4 6.5e-25 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03088 - - qsa:O6P43_000824 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03088 1 67808280 67811542 Accr1g03088 1 67808280 67811542 ECH