LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g03086	ATGGCAGAGACACGAGAGGATTCAGGGCCCACAGAGCAAGGGCCCTCTAATGCTTCTTGGTGGCCTTCAGAGTTCGTTGAAAAGCTTGGATCTGTTTCTTTGGGATCTCAAGATGAGGCCTTAAACAATAAAGAATCACCTAGACATTCAGGGCAAGGTGATATGTCACCTTATAGAGCGTCTCAAATTCTCTGGCGCACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATTCCGGAGAAAAGACTCAAGGAGCTCTTTCATAATATTCCTACTTTGGAAGAGCTTCTTGCTTTGGGAGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATGCCGAAAAAGATAAAAAGCTATCCATGTTGAAGCAGCTAGTGGTGGCGCTAGTTAAAGGATTGAACTCAAATCCAGCTGCAGTTATTAAGAAAATAGCAGGATTAGTTGCTGATTTTTACAAGCGGCCAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAACCTCCCACATGTTCGAGAGTCGAAGTGTTCAGTTGCTGGGGCAGATAAAGCATGGTTCATGTCGTCCTCGAGCGATCTTGTTTAAAGTTTTAGCTGATGCTGTAGGCCTTGAAAGTAAACTAATGGTGGGTTTGCCAGACGATGGGGTCCCTGAATGTGCAGATTCATACAAGCATTTGTCTGTCGTAGTTGTATTAAATTCTGTGGAGCTATTGGTTGATCTCATGCGATTCCCTGGCCAATTATATCCACAGTCAACCAAAGCAATTTATATGACGCATATTTCTGCAGCAGGAGAGAGTGATTCTGCAGAGAATGATTCCTGTGATTCGCCATTAGAACCGAACAGTCCTTTATATGGGGTTTCAGAGACAGTAGATATTGACAGTGCTGAAAGAGAGGAAAATCTCCAATTTCACAGAAGACATGAAGCATCTTCAAATTTATCAGGCTTCTCTTTACGAAATGCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGTGCGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCTGATGACGGCGCTACATCAAGCTACAGGTCAAATGGTGCACCCTCATCAGAAGCTCGGAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGTCTGTTGAGAGAGCAGAGGGATGATCGATCCTTCTCACATTCTCCAACCGCTAGAAGTAGTGGTGGTGATCTTCAGAAAAATGTTTCAAACTTCCATCTTGGTCATGATGAAAGATCTGCTTTATATTCTCTTAAGCATGACCAAGAATCTTCTCAAAAGGCAATGTCGTTACCCTCTTCGCCACATGAATATAGGGGTGAAGCATCTGGGAGATGTGGACCATCAGGATATGGATTAAATAATGAGCTACAAGCAACTTGGAACAGAGTCCTTGAGTCTCCAATGTTCAATAACAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGGACTCGTGTTGGGATTGGGTTCTTTGGAGAGGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTGTTCCTGGAGCAAGATTTGACTACTGAAAACATGGAAGATTTCTGCAATGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGTTATTTTATTTCTTGGCGCATGCACAAAGCCTCCACGTTTGTCAATGGTTACTGAGTACATGGAGATGGGATCTTTGTATTACTTGATCCATTTAAGTGGTCAAAAGAAGAAGCTTAGTTGGCAGAGAAGACTGAAGATGCTACGGGATATATGCAGGGGGCTGATGTGCATACATCGTATGAAGATAGTTCACCGCGACCTGAAAAGTGCCAATTGTCTTGTGAACAAGCATTGGACTGTTAAGATCTGTGATTTTGGGCTCTCAAGAATAATGACAGAGTCTCCCATGAAAGATTCTTCATCAGCGGGAACTCCAGAATGGATGGCTCCTGAACTTATTCGAAACGAACCATTCACGGAAAAATGTGACATCTTTAGCCTTGGGGTCACAATGTGGGAGCTTTGCACTCTAAGCAGGCCCTGGGAAGGCGTACCCCCTGAGAGGGTAATTTATGCCGTTGCTAACGAGGGATCCAGACTGGAGATTCCTGAGGGTCCACTGGGCAGGCTGATTTCAGATTGTTGGGCGGAACCTCATGAACGGCCTAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCATTGTGCTGA	2454	0.4385	MAETREDSGPTEQGPSNASWWPSEFVEKLGSVSLGSQDEALNNKESPRHSGQGDMSPYRASQILWRTGMLSEPIPNGFYSVIPEKRLKELFHNIPTLEELLALGGEGFRADIILVDAEKDKKLSMLKQLVVALVKGLNSNPAAVIKKIAGLVADFYKRPNVESPAKAALEETSHMFESRSVQLLGQIKHGSCRPRAILFKVLADAVGLESKLMVGLPDDGVPECADSYKHLSVVVVLNSVELLVDLMRFPGQLYPQSTKAIYMTHISAAGESDSAENDSCDSPLEPNSPLYGVSETVDIDSAEREENLQFHRRHEASSNLSGFSLRNAMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRDFADDGATSSYRSNGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDRSFSHSPTARSSGGDLQKNVSNFHLGHDERSALYSLKHDQESSQKAMSLPSSPHEYRGEASGRCGPSGYGLNNELQATWNRVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLYYLIHLSGQKKKLSWQRRLKMLRDICRGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTESPMKDSSSAGTPEWMAPELIRNEPFTEKCDIFSLGVTMWELCTLSRPWEGVPPERVIYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEDILSRLLDCEYSLC	817

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g03086	817	Gene3D	Phosphorylase Kinase; domain 1	554	639	-	-
	Accr1g03086	817	ProSitePatterns	Protein kinases ATP-binding region signature.	567	588	IPR017441	GO:0005524
	Accr1g03086	817	SMART	serkin_6	561	810	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g03086	817	Pfam	Ethylene-responsive protein kinase Le-CTR1	59	253	-	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	446	460	-	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	446	476	-	-
	Accr1g03086	817	Gene3D	Transferase(Phosphotransferase) domain 1	640	815	-	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	1	21	-	-
	Accr1g03086	817	ProSiteProfiles	Protein kinase domain profile.	561	816	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g03086	817	PANTHER	SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED	330	809	-	-
	Accr1g03086	817	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	680	692	IPR008271	GO:0004672\|GO:0006468
	Accr1g03086	817	CDD	STKc_MAP3K-like	567	809	-	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	36	57	-	-
	Accr1g03086	817	Pfam	Protein tyrosine and serine/threonine kinase	562	809	IPR001245	GO:0004672\|GO:0006468
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	392	418	-	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	492	517	-	-
	Accr1g03086	817	SUPERFAMILY	Protein kinase-like (PK-like)	536	809	IPR011009	-
	Accr1g03086	817	MobiDBLite	consensus disorder prediction	36	50	-	-
	Accr1g03086	817	FunFam	Serine/threonine-protein kinase isoform 1	551	639	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g03086	Accr-Chr1	67797436	67806481	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g03086	1	817	MAP Kinase Kinase Kinase	AT3G58640	71.429	0.0	1197

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL_CTR1-DRK-1	Accr1g03086		PK_Tyr_Ser-Thr	1e-61	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g03086	-		-	gmx:100803469	1368.6