Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03083 ATGGCTGAGAATATATACTACATATCTGACGATGACAAGAGTGAAGGTAGTGATGTGGAAGCGAGACCTAATAAGAAACGTTCATTGTTTGACTTGAACGAAGAAGCAGTGGATGAGGAAGGAAATGACACAAGTAATGAAGAAGGGAATATGAGCAGCAATAACTCGTCAAGCACAGATCAAGTGGTGAGAGAAAGAACGACAACGAATAGTGTGAGGCAATACGTGAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCTGATCTCCATCTCGCTTTTGTCCTCGCTGTTGAGAGGCTTGGTGGTCAAGAAAGAGCAACTCCAAAGTTGGTTCTTCAGCTGATGAATGTGAGAGGACTTAGCATTGCACATGTAAAAAGTCATTTGCAGATGTATCGAAGTAAAAAGCTTGATGAGTCTGGCCAGGTTTTATCTCAAAATAGGGGAATGCAGGGAAGAGCACATATTAAGGAGATGTACGAAAGATATTATAAAGCCCAAGGTCACATTGGGATAGATAATAGAAACATTCAACCCTACTCATCCGTATTAATGAAACATCCGTATGACTACTTCAAAGCCCCAGATCACTCTTCAAGGTTTCAGCCATGTGGGACAGTGAATAACCAGTGTACAGGATCCAGTTCAGAGTGGAGCAATATTAAGAGGACAGAGAAATCACACCTATTTGATGTAAGGAATGCAATAACAAGAAGTGAATCTATTGGGTGTAGAGAATTTATTGAAGGAAAGGGATGGCCTCATCGTGAAATAGTTGGAGTTGGATCACAAGTCAGTGATGGACTAGGGATTTCAAATTGGGAGGACAAGTATAATAATTCCCCTCTATGGAGAACCAAATCTAGGTTTATCCATGATCAATGCCAACGTGGTTCTAGCTCTCCATTCTTATCCACAGCTCATGCGCAATTTGATGCTAAGGTTAATGATATAAAAGATGGAATCATGCGGTGTATCGATGAGGAGGAGCTTTCACGAGGAGGTGAGGTGAAAGTCCAGATATCATCAGCAGTAGAGAGGTTGAAGGAGAAGAAAACAAGTACAAGTTTCTTAGAGTTGAGTTTAAGCCATGACTTTGGAAGCGTTAGAGATATGAACGTGGTCTCAGGTCCAAAAAAACGATGA 1146 0.4145 MAENIYYISDDDKSEGSDVEARPNKKRSLFDLNEEAVDEEGNDTSNEEGNMSSNNSSSTDQVVRERTTTNSVRQYVRSKMPRLRWTPDLHLAFVLAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDESGQVLSQNRGMQGRAHIKEMYERYYKAQGHIGIDNRNIQPYSSVLMKHPYDYFKAPDHSSRFQPCGTVNNQCTGSSSEWSNIKRTEKSHLFDVRNAITRSESIGCREFIEGKGWPHREIVGVGSQVSDGLGISNWEDKYNNSPLWRTKSRFIHDQCQRGSSSPFLSTAHAQFDAKVNDIKDGIMRCIDEEELSRGGEVKVQISSAVERLKEKKTSTSFLELSLSHDFGSVRDMNVVSGPKKR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03083 381 Gene3D - 80 137 - -
Accr1g03083 381 Pfam Myb-like DNA-binding domain 83 133 IPR001005 -
Accr1g03083 381 NCBIfam myb-like DNA-binding domain, SHAQKYF class 81 136 IPR006447 GO:0003677
Accr1g03083 381 SUPERFAMILY Homeodomain-like 79 135 IPR009057 -
Accr1g03083 381 MobiDBLite consensus disorder prediction 1 34 - -
Accr1g03083 381 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 57 175 IPR046955 GO:0003700
Accr1g03083 381 MobiDBLite consensus disorder prediction 1 71 - -
Accr1g03083 381 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 77 137 IPR017930 -
Accr1g03083 381 MobiDBLite consensus disorder prediction 46 71 - -
Accr1g03083 381 FunFam Myb family transcription factor 79 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03083 Accr-Chr1 67718551 67721222 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03083 23 142 G2-like Transcription Factor Family AT2G42660 57.851 7.92e-36 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Accr1g03083 Myb_DNA-binding 2.5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03083 - - lang:109337615 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03083 1 67718551 67721222 Accr1g03083 1 67718551 67721222 ECH