Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03079 ATGGGGACGCATTATGAGTATAAAAGGAAGGCGCAGATTGCAGTAATCGCCATTACAGTACTTACTTCTCTAGCTCTGATTGCATTGCTAGTTGCGCTCATTTACTACTGCTACAAAAGGATCAAGGTTCACCATCGCCGTGAGAACCAATCACATGCTGGCCATAACGGGGAAAGTGACTTGGCAAAACTGCAAGTTGTTGCTGATAATGGGCTTCAAGTGTTCACTTACAAGCAGTTGCATTCTGCAACCAATGGCTTTAGCAAGTCAAATGTAATTGGCCGTGGCGGATTCGGACTTGTCTACCGGGGACTGCTTTACAGTGGCGGAAATGTCGTAATTAAATTCATGGATGAGGCACAGAAGCAAGGAGAAGAAGAATTTAAAACAGAGGTGGAATTGCTTGGTCAGTTGCGCTGTCCATCTTTGCTGAAATTGATCGGGTATTGCACTGATAATAATCATAAATTGCTGGTTTACGAGTTCATGGCAAATGGGAGTCTGCAAGAACATCTTTATCCTATCAGCAATTCTTTCGTCACACCCATGAAATTGGATTGGAATACCCGGTTAAGAATAGCCCTAGAGGCTGCCAAGGGTTTGGAGTATCTTCATGAACATGTGAACCCCCCAGTTATCCACCGAGATTTCAAGAGCAGTAACATCCTCTCAGACAAACAATTTCATGCAAAAGTTTCTGACTTTGGATTAGCCAAGCATGGATCTGATAAAGCTGGTGGACATGTTTCAACTCGAGTTTTGGGCACGCACGGATATGTTGCCCCTGAATATGCACTAACTGGGCACTTAACAACCAAATCAGATGTATACAGTTATGGAGTTGTACTCCTCGAGCTGTTAACTGGTCGTGTACCGGTTGATATGGAGAGACCTCCAGGGGAAGGTGTTCTTGTTTCTTGGGCCTTGCCCCTATTGAATGATAGAGTAAATGTTGCAAAGATTATGGATCCTGCCCTGGAAGGTCAGCACTCAATGAAAGAAGTTATCCAGGTAGCCGCCATTGCTGCACAGTGTGTACAACCAGGGGCAGATTATAGGCCTCTCATGGCAGATGTTGTACAGTCATTGGCTCCACTGGTAAAGAAGACCCACAGGCCACAGGGCAACAACCTCAAAGGTTGGTAA 1146 0.4503 MGTHYEYKRKAQIAVIAITVLTSLALIALLVALIYYCYKRIKVHHRRENQSHAGHNGESDLAKLQVVADNGLQVFTYKQLHSATNGFSKSNVIGRGGFGLVYRGLLYSGGNVVIKFMDEAQKQGEEEFKTEVELLGQLRCPSLLKLIGYCTDNNHKLLVYEFMANGSLQEHLYPISNSFVTPMKLDWNTRLRIALEAAKGLEYLHEHVNPPVIHRDFKSSNILSDKQFHAKVSDFGLAKHGSDKAGGHVSTRVLGTHGYVAPEYALTGHLTTKSDVYSYGVVLLELLTGRVPVDMERPPGEGVLVSWALPLLNDRVNVAKIMDPALEGQHSMKEVIQVAAIAAQCVQPGADYRPLMADVVQSLAPLVKKTHRPQGNNLKGW 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03079 381 ProSiteProfiles Protein kinase domain profile. 87 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03079 381 Gene3D Phosphorylase Kinase; domain 1 47 162 - -
Accr1g03079 381 FunFam serine/threonine-protein kinase PBS1-like 54 162 - -
Accr1g03079 381 SUPERFAMILY Protein kinase-like (PK-like) 71 363 IPR011009 -
Accr1g03079 381 PANTHER OS07G0668900 PROTEIN 59 372 - -
Accr1g03079 381 Pfam Protein tyrosine and serine/threonine kinase 90 363 IPR001245 GO:0004672|GO:0006468
Accr1g03079 381 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Accr1g03079 381 Gene3D Transferase(Phosphotransferase) domain 1 163 378 - -
Accr1g03079 381 FunFam Receptor-like serine/threonine-protein kinase ALE2 163 377 - -
Accr1g03079 381 CDD STKc_IRAK 93 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03079 Accr-Chr1 67677432 67679359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03079 1 380 Receptor kinase-like Gene Family AT3G58690 70.263 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Accr1g03079 PK_Tyr_Ser-Thr 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03079 - - gmx:100804893 546.199