Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03075 ATGATCTCAAGATCATATACAAATCTTTTGGATTTGGCTTCAGGGAATTTCCCAGCAATGGACATGGAGGTTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGACTGTCCCTGGGATAATTTCAGAACTTGATGATGATCAGGCACATAGTGTTTCTTCTGATAATCCATCAACTGTTTCTACAGTTAGGATGATCATTGTAGCTAACCAGCTTCCTTTGAAAGCAAGGCGAAAGGAAGATAATAAGGGGTGGAGTTTCAGTTGGAATGAAGATTCATTGCTTTTACAGCTTAAAGATGGATTTCCTGAAGATATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGTTGTTGATCCAGCCGAACAGGATGATGTGTCACAGTATTTATTGGACAAATTCAATTGTGTTCCTACTTTTCTGCCCCCGGATGTTTTGATTAAATTTTATGATGGTTTCTGCAAAAGGCAGTTATGGCCACTGTTTCATTACATGTTACCGTTTTCAACTGACAAAAACCATCGGTTTGATCGTTCTTTGTGGGAGGCTTATGTCATGGCAAATAAGATTTTTTTTCAGAAGGTAGTTGAGATAATAAACCCAGAGGATGATTATATTTGGATTCATGATTATCATTTGATGGTACTGCCAAGTTTTATTAGAAGACGTTTTAACAGAGTGAAAATGGGGTTTTTTCTCCATAGCCCCTTTCCATCTTCAGAGATATACAGGACTCTTCCTGTGAGGGAAGAGATACTTAAAGCTTTACTTAATTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGTCATTTCCTGTCCTGTTGCAGTCGTATGTTGGGCCTGGAGTATCAGTCAAAGAGGGGTTACTTAGGATTGGAATATTACGGGAGGACTATAAGTATTAAGATTATGCCAGTCGGGGTTCACATGGATCGAATTAAAATAGTCATGAAAATGGCAGATGAAGAGTCTAAAGTAAAGGAGCTGAAACAGCAATTTGAAGGAAAAACTGTATTGCTTGGTGTTGATGATATGGACGTTTTTAAAGGCATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTCAGTCAACACCCTAGATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAGTCCTGCTAGGGGTATTGGTATGCATCTAGAGGGCATACGGGCTGAAATCCAAGAAAGCTGCAGCAGGATCAACAGAGCATTTGGGCGTCCTGGTTACGAACCTATTGTTTTTATAGATAGACCAGTTTCAGCTGCTGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTGTTGTCACAGCTGTAAGAGATGGGATGAACCTAACTCCTTATGAATATATTGCATGTAGACAGGAAATGCCCGGTTCTGAATCATGTAACAATGCCAATGGCTCAAAGAGCATGCTAGTGATATCAGAATTTATAGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCTGAGGCAATGAACGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGGTATGTTAGCACTCATGATGTGGCTTATTGGTCACGTAGTTTCTTGCAAGATATGGAGAGGGCTTGCTCAGACCTCCTGCAGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCCATTGATGTGATGGTTTCAGCCTACAAGAGGGCAAAGAGTAGGGCCATTTTGCTGGACTATGACGGCACTGTTATGCCACAGAACTCTATTAATAAGAGTCCAAGTCCAGAGGTCATCTCTATTTTGAACACACTCAGTGCAGACCCCAAAAATGTAGTTTTTATTGTTAGTGGGAGGGGGAGGGATAGCTTAAGTAACTGGTTTACCCCCTCCAAAAAAATTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCTCAGTGTGAAGAATGGGAAATTTGTGGTAAGAGCTCTGATTTTGGCTGGATTCAGATTGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCTAGCATCGAGAAAAAGGAAAGTGCTTTGGTGTGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCCAAGGAAATGTTGGATCATCTAGAAAGTGTTTTGGCCAATGAGCCAGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTGGTTGCGGAAAATATCTTTTCATCAATGGATGTACAAGGGAAACAGGCTGACTTTGTCCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAATGATCAGTATTGCCATGTCTAGAAATATTCTTTCTGCCAATTGTGCCGTATTCGCTTGCACAGTTGGACAAAAACCAAGTAAAGCCGAGTATTATTTGGACGATACGTCTGAAGTCATTACCATGCTAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAG 2541 0.4128 MISRSYTNLLDLASGNFPAMDMEVKERKRLPRVMTVPGIISELDDDQAHSVSSDNPSTVSTVRMIIVANQLPLKARRKEDNKGWSFSWNEDSLLLQLKDGFPEDMEVLYVGSLRVVVDPAEQDDVSQYLLDKFNCVPTFLPPDVLIKFYDGFCKRQLWPLFHYMLPFSTDKNHRFDRSLWEAYVMANKIFFQKVVEIINPEDDYIWIHDYHLMVLPSFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMDRIKIVMKMADEESKVKELKQQFEGKTVLLGVDDMDVFKGIDLKILAMEQMLSQHPRWQGRAVLVQIVSPARGIGMHLEGIRAEIQESCSRINRAFGRPGYEPIVFIDRPVSAAEKAAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMPGSESCNNANGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACSDLLQKRCWGIGLSFGFRVVALDPNFRKLSIDVMVSAYKRAKSRAILLDYDGTVMPQNSINKSPSPEVISILNTLSADPKNVVFIVSGRGRDSLSNWFTPSKKIGIAAEHGYFLRWSQCEEWEICGKSSDFGWIQIAEPVMKLYTEATDGSSIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAENIFSSMDVQGKQADFVLCVGDDRSDEDMFEMISIAMSRNILSANCAVFACTVGQKPSKAEYYLDDTSEVITMLESLAEESDSA 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03075 846 SUPERFAMILY HAD-like 592 840 IPR036412 -
Accr1g03075 846 FunFam Alpha,alpha-trehalose-phosphate synthase 317 529 - -
Accr1g03075 846 CDD HAD_TPP 593 832 - -
Accr1g03075 846 CDD GT20_TPS 63 545 IPR001830 GO:0003824|GO:0005992
Accr1g03075 846 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 56 315 - -
Accr1g03075 846 Gene3D - 591 691 IPR023214 -
Accr1g03075 846 Gene3D - 720 846 IPR023214 -
Accr1g03075 846 Pfam Glycosyltransferase family 20 63 545 IPR001830 GO:0003824|GO:0005992
Accr1g03075 846 Gene3D Glycogen Phosphorylase B; 57 318 - -
Accr1g03075 846 NCBIfam trehalose-phosphatase 589 840 IPR003337 GO:0003824|GO:0005992
Accr1g03075 846 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 591 708 - -
Accr1g03075 846 Pfam Trehalose-phosphatase 595 830 IPR003337 GO:0003824|GO:0005992
Accr1g03075 846 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 31 841 IPR001830 GO:0003824|GO:0005992
Accr1g03075 846 NCBIfam HAD-IIB family hydrolase 594 797 IPR006379 -
Accr1g03075 846 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 721 846 - -
Accr1g03075 846 Gene3D Glycogen Phosphorylase B; 319 530 - -
Accr1g03075 846 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 63 548 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03075 Accr-Chr1 67646360 67650035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03075 1 846 Trehalose Biosynthesis Gene Families AT1G06410 77.069 0.0 1356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03075 K16055 - gmx:100811463 1511.51