Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03074 ATGAACAGAAATTCCAACAATTTCGCACCTTTACCTGGTGCTAGGCGATCTGTTGCAAGACCCTATGATAATTATAGAAGCTACGATGAGATTACTGTGTTCTACCAACCTCCTTCTATCCAAGCTACTCCTGGTGACAGGATTTCAGGCGTGCAAGACACCCCAAGGTTGATGGAAAACAGAACACGGTCAGGACTCAACCGCACACCCAGTTTTCCAACACAACCACATAGCAGACGACAAATTAACGGATTCAATGAGAGCATGAGAAGGGGGTTGAACCCCATGTTCGGAGAGACTGTCCAGCAGCCACCTCCAAGAACTGTAGAAAATCCAAACTCAGCAGTTTTGAGCAAGCTGAAGAAAGAAATATATGAGCCCCCAAAGATTTTACCAAAGAGAGTGAGCTTATGCTATAAAGACAGTGTTGCGAATGCTTTAAAAGAGAGCGAGAGGGAAACGCAAGAACGTCGCAAGAATTGTGCTATTTGCCTGGAAGATTTTGAACCTCGAGAGGAGGTGATGCTCACACCATGCAAACACGTGTTTCATGAGGATTGTATCGTACCATGGGTAAGAAGCAAAGGCCAGTGCCCTGTGTGCAGGTTTGTGATTTGTGAGGAGACGAGGGAACACATTTCATCCTTCGACGACGACAGGGCCATGATGGCACCCAGTGGCCTAATTTCAGGCGAGCTTCTATCAATTTTCAGAGCCATGCAAGAAGCTCTCCAAATGGGCAATGGGACTCAGTAA 756 0.4643 MNRNSNNFAPLPGARRSVARPYDNYRSYDEITVFYQPPSIQATPGDRISGVQDTPRLMENRTRSGLNRTPSFPTQPHSRRQINGFNESMRRGLNPMFGETVQQPPPRTVENPNSAVLSKLKKEIYEPPKILPKRVSLCYKDSVANALKESERETQERRKNCAICLEDFEPREEVMLTPCKHVFHEDCIVPWVRSKGQCPVCRFVICEETREHISSFDDDRAMMAPSGLISGELLSIFRAMQEALQMGNGTQ 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03074 251 FunFam RING/U-box superfamily protein 145 219 - -
Accr1g03074 251 MobiDBLite consensus disorder prediction 61 80 - -
Accr1g03074 251 Pfam Ring finger domain 160 202 IPR001841 -
Accr1g03074 251 PANTHER RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING 77 203 - -
Accr1g03074 251 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
Accr1g03074 251 SUPERFAMILY RING/U-box 160 208 - -
Accr1g03074 251 SMART ringv_2 160 202 IPR011016 GO:0008270
Accr1g03074 251 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 217 IPR013083 -
Accr1g03074 251 SMART ring_2 161 201 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03074 Accr-Chr1 67644450 67645604 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03074 111 248 C3H Transcription Factor Family AT3G58720 47.973 8.65e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03074 - - pcin:129315451 393.275