Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03062 ATGTTGTTTGGTACTCTGGGAAGTTTTGGAGATGGGATACAAATGCCTCTCATGATGTTCATTCTTAGTAATGTAATTAATGACTATGGAAGCTCCAATAACGTTTTAACAAAGCAAGATGCAGACAAGTATGCTTTAAGGCTTTTATATGCTGCAATTGGATCTGGACTTTCAGCTTTTGTTGAAGGAATATGCTGGACAAGAACTGCAGAGAGACAAACTTCAAGAATGAGAGTAGAATACCTAAAATCAGTACTTCGACAAGAAGTTGGTTTCTTTGACACCCAGGAAGTTGGTTCTTCAACAACTTACCAAGTTGTCTCCCACATTACTGCTGATGCCAACTCAATTCAAGATGCTTTAAGTGAAAAGATACCCAGCTGCTTGGCAAACATCTCCACGATTTTATCCTGCCATGTCTTTGCATTTATTCTGTCATGGAGACTAACATTGGCAGCTATACCAATCACAGTCATGTTCATCGTTCCAGCACTTGTATTTGGGAAGATCATGTTGGATCTAGCAATGAAAATGATTGAATCTTATGGGGTTTCTGGTAGGATTGCAGAACAAGCAATATCATCAATAAGAACTGTTTATTCATATGTGGGGGAGAATCAAACACTGAACAGATTTAGCAGTGCCCTTGAGAAAACAATGGAACTGGGAATAAAACAGGGTTTTGCAAAGGGTCTGATGTTAGGCAGCCTAGGGATTTTATACATTGGTTGGGGCTTCCTGGCTTGGATTGGTACTATTTTGATCACTGAGAAAGGAGAGCAGGGTGGCCATGTATTTGTGGCCGGGTTAATCATCCTCATGGGTGGCTTGATGGTGTTAAGTACGCTTCCACATTTAACTGCCATCATGGAGGCATCTGTAGCTGTCACCCGTCTTTTTGAAATGATTGATAAAATGCCAACTACAGATTCTGGAGGCAAAAAGAGAAGAGCTTTATCATATGTGAGAGGAGAAATTGAATTTCAAAATGTTTACTTTAGTTACCCATCTAGGCCAGATACACCAGTCTTGCAAGGGCTTAACCTTACAGTTCCAGCAGGCAAGAGAGTAGGTATTGTGGGGTTTAGTGGTTCAGGCAAGTCCACCATCATTGCTTTGCTTGAGAGATTTTATGAACCTGATGCAGGAGAAATACTCTTGGATGGCCACAAGATCAACAGACTTGAGATAAAATGGTTGAGATCTCAACTTGGCCTAGTAAATCAAGAACCGGTTCTTTTTGCCACAACCATAAAAGAGAATATATTGTTTGGAAAAGAAGGAGCCTCCATGGAAAGTGTGATAACTGCAGCTAAAGAAGCAAATGCACATGACTTCATCATCAATCTACCAGATGGATATGAAACCCAAGTTGGGCAGTTTGGATTTCAATTATCTGGAGGGCAAAAGCAGCGAATTGCCATAGCAAGAGCTTTGCTCAGGGATCCAAAAGTTCTGCTTCTTGATGAAGCTACTAGTGCACTAGACTCACAATCAGAAAGAGTGGTACAAGCAGCAATTGATCAAGCTTCAAAGGGAAGGACAACAGTCATAATTGCTCACCGTTTGTCTACAACACAATCTGCCCACATTATTGCAGTTCTTCAAGCTGGCAGAGTCATTGAATTAGGTGCTCATAATGAGCTCATGGAAATGAACAATGGACAAGGTGGGGAATATGCAAGGATGGTAGAGTTGCAGCAAGTAAGAATAGTGAATGAAGATTCCAAATATTCCAATCTTGAAACAGAGGGAAGTGATCTCCACCAGAAGATAAGCACTCCAGGCAGCCCAATTTTATATTTATTCGACCAGACTCATTCCTTGGGTTCACCCTACCAGGCTCATTCCATGGGTTCACCCTACTCCTTCTCCATCCAATATGATTCTAAAGATGATTTTACTGAAGATTTATTCAAAATATCAACTTATCCAGCTCCTTCCACTTGGCGTTTGTTGGAGATGAATGCACCTGAGTGGAGAATAACAGTGCTTGGATGCTTGGGCGCACTAGGCTCTGGAGCAGTACAACCAATAAATGCATATTGTGTAGGGATACTTATATCAAACTATTTTGACAATGAAGTCACTAAGAACAAGTCCAAAACTAGAGTCTTGGCTCTTACTTTCCTAGCAATTGGTGTTTTTAACTTCCTCACAAATATTCTTCAACACTATAGTTTTGCTGTTGGGGGAGAGAGATTGACTAAAAGAATACGAGAAAAATTACTAGGAAAATTGTTGACTTTTGAAATAGGCTGGTTTGATGATGCAGAGAACACAAGTGCAGCCATTTGTGCAAGATTAGCCTCTGAAGCTAACATGGTTCGCTCCTTTGTTGGAGATCGTTTGTCATTATTGACACAAGCAATTTTTGGATCTATATTTGCTTATGCTCTTGCATTGGTGCTTACATGGAGGCTATCCCTTGTGATGATTGCTGTACAACCATTAATCATAGGGAGCTTTTACTCAAGAAGTGTCTTGATGAAGACGATGGCGAAAAAGGCCCGGAAAGCACAAAATGAAGGAAGCCAACTGGCAAGTGAAGCTGTAAGAAACCACAGAACTATAACTGCCTTCAGTTCTCAGAAAAGAATGTTGGCCCTTTTCAAATCCACATTAGTAGGTCCTCAAAAAGAGAGCATTAGACAGTCATGGATTTCAGGCTTTGGTCTTTTTTGCTCACAATTTTTCAACACTGCTGCAACAGCTTTAGCTTACTGGTATGGAGGGAGGCTCTTGATTGAAGGGAAAATAAAACCAACACATCTTTTTCAAGCATTTTTTATATTGTTCTTCAGTGCTTATATCATTGCAGAAGCTGGAAGCATGACGTCTGACTTATCTAAAGGAAGCAGCGCAGTTCGATCAGTGTTTCAAGTCTTGGACAGAAAAAGTGAGATTGATCCTGAGAACACAGGGGAAGTAAGTATAAAGAACAAAATAAGGGGCGAAGTGGAACTTAAAGGTGTTTTCTTTGCGTATCCAACTAGACCAGAGCAGATGATTTTTAGGGGTCTGTGTCTTAAAGTTGAGGCAGGAAAAACAGTAGCACTAGTGGGACAAAGTGGTTGCGGTAAATCAACCATTATTGCTCTCATTGAAAGGTTTTACGACCCAGTGAATGGAACAGTGTGCATAGACGAACAAGACATCAAGTCCTATAACTTGAGAGAGCTAAGGTCACATATTGGCCTTGTGAGTCAGGAGCCAACCCTTTTCGGCGGAACCATTCAAGAAAACATTGTCTATGGGAAAGAGAATGCAACTGAAGCTGAGATGAGAAAGGCTGCAGATTTGGCTAATGCTCATGAATTTATTAGTGGAATGAAGGATGGGTATGAGACATATTGTGGAGAAAGAGGAGTTCAGCTATCAGGAGGTCAGAAACAAAGGATAGCCTTAGCACGTGCGATATTGAAGGATCCTGCAATTTTATTGCTAGACGAGGCTACGAGTGCGCTTGATAGTGTGTCAGAGAAGTTAGTTCAAGAAGCATTAGAGAAGATGATGGTTGGAAGAACATGCATTGTTGTGGCTCACAGGCTATCAACAATACATAAATCAAACTCTATTGCAGTGATTAAGAATGGGAAAGTTGTGGAACAAGGTTCGCATGATGAACTAGTTTCTCTAGGACAAGATGGAGCATACTATTCTCTTGTTAAACTTCAACATGGCAAATCTCTTGACAGGTAG 3702 0.4073 MLFGTLGSFGDGIQMPLMMFILSNVINDYGSSNNVLTKQDADKYALRLLYAAIGSGLSAFVEGICWTRTAERQTSRMRVEYLKSVLRQEVGFFDTQEVGSSTTYQVVSHITADANSIQDALSEKIPSCLANISTILSCHVFAFILSWRLTLAAIPITVMFIVPALVFGKIMLDLAMKMIESYGVSGRIAEQAISSIRTVYSYVGENQTLNRFSSALEKTMELGIKQGFAKGLMLGSLGILYIGWGFLAWIGTILITEKGEQGGHVFVAGLIILMGGLMVLSTLPHLTAIMEASVAVTRLFEMIDKMPTTDSGGKKRRALSYVRGEIEFQNVYFSYPSRPDTPVLQGLNLTVPAGKRVGIVGFSGSGKSTIIALLERFYEPDAGEILLDGHKINRLEIKWLRSQLGLVNQEPVLFATTIKENILFGKEGASMESVITAAKEANAHDFIINLPDGYETQVGQFGFQLSGGQKQRIAIARALLRDPKVLLLDEATSALDSQSERVVQAAIDQASKGRTTVIIAHRLSTTQSAHIIAVLQAGRVIELGAHNELMEMNNGQGGEYARMVELQQVRIVNEDSKYSNLETEGSDLHQKISTPGSPILYLFDQTHSLGSPYQAHSMGSPYSFSIQYDSKDDFTEDLFKISTYPAPSTWRLLEMNAPEWRITVLGCLGALGSGAVQPINAYCVGILISNYFDNEVTKNKSKTRVLALTFLAIGVFNFLTNILQHYSFAVGGERLTKRIREKLLGKLLTFEIGWFDDAENTSAAICARLASEANMVRSFVGDRLSLLTQAIFGSIFAYALALVLTWRLSLVMIAVQPLIIGSFYSRSVLMKTMAKKARKAQNEGSQLASEAVRNHRTITAFSSQKRMLALFKSTLVGPQKESIRQSWISGFGLFCSQFFNTAATALAYWYGGRLLIEGKIKPTHLFQAFFILFFSAYIIAEAGSMTSDLSKGSSAVRSVFQVLDRKSEIDPENTGEVSIKNKIRGEVELKGVFFAYPTRPEQMIFRGLCLKVEAGKTVALVGQSGCGKSTIIALIERFYDPVNGTVCIDEQDIKSYNLRELRSHIGLVSQEPTLFGGTIQENIVYGKENATEAEMRKAADLANAHEFISGMKDGYETYCGERGVQLSGGQKQRIALARAILKDPAILLLDEATSALDSVSEKLVQEALEKMMVGRTCIVVAHRLSTIHKSNSIAVIKNGKVVEQGSHDELVSLGQDGAYYSLVKLQHGKSLDR 1233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03062 1233 Gene3D ABC transporter type 1, transmembrane domain 635 974 IPR036640 GO:0005524|GO:0016020
Accr1g03062 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 567 IPR027417 -
Accr1g03062 1233 FunFam ABC transporter B family member 4 316 575 - -
Accr1g03062 1233 FunFam ABC transporter B family member 4 977 1230 - -
Accr1g03062 1233 Pfam ABC transporter 1008 1154 IPR003439 GO:0005524
Accr1g03062 1233 SUPERFAMILY ABC transporter transmembrane region 1 307 IPR036640 GO:0005524|GO:0016020
Accr1g03062 1233 PANTHER ABC TRANSPORTER B FAMILY 1 721 IPR039421 -
Accr1g03062 1233 CDD ABC_MTABC3_MDL1_MDL2 326 567 - -
Accr1g03062 1233 Gene3D - 977 1232 IPR027417 -
Accr1g03062 1233 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 664 951 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g03062 1233 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 2 291 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g03062 1233 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 326 562 IPR003439 GO:0005524
Accr1g03062 1233 CDD ABC_6TM_Pgp_ABCB1_D1_like 1 299 - -
Accr1g03062 1233 CDD ABC_6TM_Pgp_ABCB1_D2_like 655 969 - -
Accr1g03062 1233 Gene3D ABC transporter type 1, transmembrane domain 1 578 IPR036640 GO:0005524|GO:0016020
Accr1g03062 1233 Pfam ABC transporter transmembrane region 1 275 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g03062 1233 Pfam ABC transporter transmembrane region 665 936 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr1g03062 1233 Pfam ABC transporter 344 493 IPR003439 GO:0005524
Accr1g03062 1233 SUPERFAMILY ABC transporter transmembrane region 651 970 IPR036640 GO:0005524|GO:0016020
Accr1g03062 1233 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 987 1223 IPR003439 GO:0005524
Accr1g03062 1233 CDD ABC_MTABC3_MDL1_MDL2 987 1226 - -
Accr1g03062 1233 Gene3D - 316 568 IPR027417 -
Accr1g03062 1233 ProSitePatterns ABC transporters family signature. 465 479 IPR017871 GO:0005524|GO:0016887
Accr1g03062 1233 SMART AAA_5 1014 1200 IPR003593 GO:0016887
Accr1g03062 1233 SMART AAA_5 353 545 IPR003593 GO:0016887
Accr1g03062 1233 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 980 1226 IPR027417 -
Accr1g03062 1233 ProSitePatterns ABC transporters family signature. 1126 1140 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03062 Accr-Chr1 67519632 67524386 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03062 2 568 Calmodulin-binding Proteins AT2G36910 35.009 3.66e-101 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03062 K05658 - gmx:100788127 1886.31