Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03057 ATGGTTGGCCCGGAGGAAAACACCAATTGGCTTTTCGATTATGGTTTAATTGATGATATAACCGTCCCGGATGAGAGCTTTACTATACCTGCTTCCGGGTTCAGCTGGCCGGCGCAGGCCTTGAATGGTTCTTCCAATATCAGCGCTGAAATTGATGGCACGTTGGGGGATGCTGATGGTGTGAAAGAGTCTGGTTCAAAGAAGAGGGGTAGACCTGAATCATGTCCTGCTTCTAGTTCAAAGGCATGTCGCGAAAAGCTGAGGAGGGACAGGCTGAATGACAAGTTTCTTGAAATAGGCTCTATTTTGGAGCCTGGAAGGCCTGCCAAAACAGACAAGGCTGCTATTCTGGTTGATGCTGTTCGAATGGTGACACAATTACGGGGTGAAGCCGAGAAGTTGAAGGACTCGAACATGAATCTTCTAGAGAAGATTAAAGAGCTAAAGGCAGAGAAGAATGAACTACGAGATGAGAAACAGAGGCTCAAGGCTGAGAAAGAGAAGTTGGAGCAGCAACTGAAAGCTATCAATGTCCAACCTAATTTCATGCCTCCGCCTCCTGCAATCCCTGCTGCATTTGCTGCTCAAGGCCAAGCCCCTGGCAGCAAGTTGGTCCCTCTTATTGGTTATCCTCCTGGCGTTGCCATGTGGCAATTTATGCCTCCGGCTGCTGTGGATACTTCACAGGACCATGTGCTCCGTCCACCAGTTGCTTAA 717 0.4868 MVGPEENTNWLFDYGLIDDITVPDESFTIPASGFSWPAQALNGSSNISAEIDGTLGDADGVKESGSKKRGRPESCPASSSKACREKLRRDRLNDKFLEIGSILEPGRPAKTDKAAILVDAVRMVTQLRGEAEKLKDSNMNLLEKIKELKAEKNELRDEKQRLKAEKEKLEQQLKAINVQPNFMPPPPAIPAAFAAQGQAPGSKLVPLIGYPPGVAMWQFMPPAAVDTSQDHVLRPPVA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03057 238 PANTHER BHLH TRANSCRIPTION FACTOR 4 238 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Accr1g03057 238 Gene3D - 78 153 IPR036638 GO:0046983
Accr1g03057 238 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 76 127 IPR011598 GO:0046983
Accr1g03057 238 CDD bHLH_AtILR3_like 81 156 - -
Accr1g03057 238 Coils Coil 124 179 - -
Accr1g03057 238 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 68 136 IPR036638 GO:0046983
Accr1g03057 238 SMART finulus 82 133 IPR011598 GO:0046983
Accr1g03057 238 MobiDBLite consensus disorder prediction 52 84 - -
Accr1g03057 238 Pfam Helix-loop-helix DNA-binding domain 80 127 IPR011598 GO:0046983
Accr1g03057 238 CDD bZIP 143 174 - -
Accr1g03057 238 FunFam Transcription factor bHLH34 67 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03057 Accr-Chr1 67445138 67447416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03057 1 238 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 72.614 1.20e-113 323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Accr1g03057 HLH 1.5e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03057 - - qsu:112027386 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03057 1 67445138 67447416 Accr1g03057 1 67445138 67447416 ECH