Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03054 ATGGCAATTCAACGAATTTTGAGTGTTGTAACGGTCAGCTTTTGCGTTCTTTTGTTTCTTCTTCTTACTTCAACTGGTAACTTGCAAGAGAGTGAAGAAACACGAAAAGACTTCCTTAGCCAGCTACTTGATCCGTCATCTGGATTGTTGTTAGATGATAACACGGCAGAACAGTTATGGTCCTCATGCTGGGTGGATTTGATTCAGTTAAAGGGAGAGGTAGATGATCTTGTTGTATGGTTCCCGCAAGAACCATCCAGTAGCCCAGATGAAAATTCAGATATCCGATATTTGATGAGAGAAAACATCCAAAAATTGATCAATACTCACCATCCACAGTTAAAGCAAACTTTTCTTCATTGTTTGAGACAGAATGATCTACCATTCCGTGTCTCTGGAGAAGAGCCTGATTCTAAGACATGGCATGCCTCATTTATAGAATCAATGTTTTCCAGATCCAGTGTTCTTAGAAGAAATTTGGCTCAGGAATTTCCTCAACGCATATCAGTGGCACCTAGCCCAGGTCCTGCAGTTATGTCACCGGCTCCCAGTCCAGCACCATCACTAGTGCCAGTCCCATCACCTGCCATCTCTCAAGTTCCTAAATCTGGGCATCCTTCTTCATCACCTGAAACTCCATTCTTCCGACAGCTGGATCCTCCAGCTATTGGGGATACCACTGGACAGCGATCTTCAGATGCTGGTACACAGGCTGATAAGAAAAGTAATCATGAAAGAAGAGTTGTTCTTGCTGTAGTAATAACTGCTCTTGGGACCTTTGTAATTGCAGCACTGCTATTTTTATGCTGCAGTAGGTTTTATAGGACTCGTCGTGGTAGACAAAATGATCAGCGACCCCTTCTTGGCATGACCATGAGTGACTACTCTATTGGCTCTCCCCATTATTTTGGAAATTCAGTCAAAGAGGATAAACTTGGGTTTCAGTCATCAAGTAATAGCACTGGTGACCACAAAAAGATATCATCTGGGAATGCCAATTCCTATGTTAGCTCCAATATTTTCCATACCACAGTGCAGGAAACTCAGTCAATTGGTGCTGTCGGTGTTGCTGAGGGAACCACCACTTCTGGATTGCCTACACTAAAACCTCCTCCTGAGAGGGTGGGAACCACCACTTCCGGATTTCCTCCTTTGAAACCTCCTCCCGGGAGGGCTAGAACCCCCACTTCGGGATTGCCTCCTCTAAAACCTCCTCCTGGCAGACTGAGTCCCCTCCCCCATGAACCACCTTTTAGACCTGATAATGCTGCTCCTCCTCCACCTCGACCTTCCACACCTTCACCTGTGAAATCTCACTTTGATGCTGGTGGAGTTCCAACTCCAGGACCTCCTCCACCTCCTCCTCCTGCACCCCCACAAACACTGAAACATCATTCTAATGTCAGTGGAGCTCCACCTCTTGGACCTCCACCACCGCCACCAGCACCACCTGGTGCCCGACCAAGTGCTCATCCACCACCACCTCCTCCGCCAAAGAGCAGTATAGCCGCTCTAAGACCTCCTCCACCCAGTGGTCCAAAGACAGCACAGCAAAAATCACAGAATGCAGGAGCTCGTTCAGAAGGTGAAGGCCAAGCTTCCAAAGCCAAGCTAAAACCTTTCTTCTGGGATAAGGTCCAAGCCAACTCAGATCATTCAATGGTCTGGAATCAGATTAAATCAGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGATATAGTAATGTGGATAAACACAAAGGCGAGCCAAACAAAGAGTCATCATCCCAAGACCCTGCAACTCAGTATATCCAGATAATTGACAGGAAAAGAGCACAAAATTTATTGATTTTGCTGCGACCTTTGAACATCACTACAGAAGAAGTTTGTGATGCACTTCATGAGGGAAATGAGCTTCCCCCAGAATTTCTGCAAACCTTGTTGAAGATGGCACCAACATCCGAGGAAGAACTTAAGCTTAGGCAATTCAGTGGTGAAATATCCCAACTTGGGCCTGCAGACCAGTTCCTAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCGTTGCTTTTCATGAGTACTTTTCAAGAGGATCTCACAGCCACTAAGGAGTTGTTTGCGACTTTAGAGGTTGCATGTAAGGAACTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTAGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGTACATATCGTGGTGGTGCACAAGCATTTAAACTTGATACGCTACTGAAACTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTACACTTCGTAGTCCAAGAGATAGTCCGCTCTGAGGGCAAAAGAGCTGCTCGACTGGAAAGAGAAAATCAGAGATCCTCTGATATTAAAAAGGATGGCCGTGTTGGGGATGTATCTGATGAAACTGATGAACACTATCACGATCTTGGTCTCCAGGTGGTTTCACATTTGAGCAGCGAACTAGAGAATGTCAAGAAAGCAGCAGCTATTGATGCTGACAGCTTAACGGGAACTGCGGCCAAACTTGGCCATGGTCTCCTTAAAATCAGAAATTTTGTGAACAGTGACTTGAAGAGCATAGAGGAAGATAGAGAATTTTGTCAGGCAGTGACGGCTTTTGTGCAGGATGCGGAGAAAGATGTCACTAGTCTGCTGGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAGCACTGGTGATTATTTTCACGGCAAAGCTGGGAAAGATGAAGGATTGCGGTTGTTTGTGATTGTACGGGACTTCTTGCTGATGTTAGATAAGGTGTGCAAGGAGGTGGCAGGCGCCCAGAAGAAGCAAGCAAAAGCTCAAAAGCAGGAGGCGCCTAAAGCATCATCTTCCTCTGATGTTCGTTCACCACCTGATTTTCGTCAGCTGCTATTTCCAGCAATTACTGATAGACGGGTGAAAGACGATAGTTCAGACGATGAGAATGAACCTTGA 2988 0.4541 MAIQRILSVVTVSFCVLLFLLLTSTGNLQESEETRKDFLSQLLDPSSGLLLDDNTAEQLWSSCWVDLIQLKGEVDDLVVWFPQEPSSSPDENSDIRYLMRENIQKLINTHHPQLKQTFLHCLRQNDLPFRVSGEEPDSKTWHASFIESMFSRSSVLRRNLAQEFPQRISVAPSPGPAVMSPAPSPAPSLVPVPSPAISQVPKSGHPSSSPETPFFRQLDPPAIGDTTGQRSSDAGTQADKKSNHERRVVLAVVITALGTFVIAALLFLCCSRFYRTRRGRQNDQRPLLGMTMSDYSIGSPHYFGNSVKEDKLGFQSSSNSTGDHKKISSGNANSYVSSNIFHTTVQETQSIGAVGVAEGTTTSGLPTLKPPPERVGTTTSGFPPLKPPPGRARTPTSGLPPLKPPPGRLSPLPHEPPFRPDNAAPPPPRPSTPSPVKSHFDAGGVPTPGPPPPPPPAPPQTLKHHSNVSGAPPLGPPPPPPAPPGARPSAHPPPPPPPKSSIAALRPPPPSGPKTAQQKSQNAGARSEGEGQASKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYSNVDKHKGEPNKESSSQDPATQYIQIIDRKRAQNLLILLRPLNITTEEVCDALHEGNELPPEFLQTLLKMAPTSEEELKLRQFSGEISQLGPADQFLKALVDIPFAFKRMEALLFMSTFQEDLTATKELFATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAARLERENQRSSDIKKDGRVGDVSDETDEHYHDLGLQVVSHLSSELENVKKAAAIDADSLTGTAAKLGHGLLKIRNFVNSDLKSIEEDREFCQAVTAFVQDAEKDVTSLLEEEKKIMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLLMLDKVCKEVAGAQKKQAKAQKQEAPKASSSSDVRSPPDFRQLLFPAITDRRVKDDSSDDENEP 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03054 995 Gene3D Formin, FH2 domain 534 967 IPR042201 -
Accr1g03054 995 Coils Coil 934 954 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 954 968 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 382 434 - -
Accr1g03054 995 SUPERFAMILY Formin homology 2 domain (FH2 domain) 476 952 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 172 242 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 788 808 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 946 995 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 176 194 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 471 514 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 445 461 - -
Accr1g03054 995 ProSiteProfiles Formin homology-2 (FH2) domain profile. 528 960 IPR015425 -
Accr1g03054 995 MobiDBLite consensus disorder prediction 200 214 - -
Accr1g03054 995 Pfam Formin Homology 2 Domain 533 934 IPR015425 -
Accr1g03054 995 PANTHER FORMIN-RELATED 450 983 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Accr1g03054 995 SMART it6_source 528 952 IPR015425 -
Accr1g03054 995 MobiDBLite consensus disorder prediction 979 995 - -
Accr1g03054 995 MobiDBLite consensus disorder prediction 358 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03054 Accr-Chr1 67414836 67420561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03054 537 941 FH2 protein (formin) Gene Family AT3G05470 50.485 1.06e-122 394
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03054 - - pcin:129315422 1390.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03054 1 67414836 67420561 Accr13g00850 13 9714555 9720062 CCT
Accr1g03054 1 67414836 67420561 Accr1g03054 1 67414836 67420561 ECH