Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03052 ATGCCAACAGTTTGGTTCTCTCTCAAGAAGTCACTACACTGCAAATCGGAGCCATCAGAAGTTCATGACCCGAAATCCAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGCTGGTAGGTCTGGGTGTTCGAGGAGTATTGCAAATCTCAAAGATGTGATCCATGGAAGCAAAAGGCATCTCGAGAAGCCACCAAGTTGCAGTCCAAGATCCATTGGGAGCAGTGAGTTTCTCAACCCAATAACCCACGAAGTGATTTTAAGCAACTCAAGGTGTGAGCTTAAAATCACTGGCTTTGGAGGATTTCAAGATGGGGTTGGGGGCGTTGCTAACGGTGGTGGAGGAGGTTGCGGTGGCGGTGGTAATAATGGTGGTAGTGGGGGCTCTACCTTTGTGGGTACTTTAAGGCCTGGGACTCCGGGACCCGGAGGACACCCTACAATGCACTACTTCAATCCTTCTTTTAGGACATCAACCACACCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGGTCTGCTTTGCATGGTCATGGTGGTGGTGGTGGGCTTCATTCTAGCAATAGGATGTCTCTTGAGACTGACTCTAATGGCTGTTCCACTGTCACTTGTCACAAATGTGGAGAGCAATTTACCAAATGGGAAGCTGCTGAGACTCATCATCTCTCCAAGCATGCTGTCACTGAACTTGTGGAAGGCGATTCATCAAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAGTCTGAGAATCACTGCGGTCGAATAGAGAGAGTTTTGAAGGTCCACAACATGCAAAAGACACTGGCTCGATTCGAAGAGTACAGAGAGATGGTAAAAATCAAAGCCAGCAAGCTCCCAAAGAAACATCCTCGGTGTCTTGCTGATGGAAACGAACTTTTAAGGTTCTATGGCACTACAGTGGCCTGCAATCTTGGTCTCAACGGCTCATCCAGCCTCTGCCTCTCAGAAAAATGTTGTGTTTGTCGAATTATCAGAAATGGGTTCTCGGCAAAGAAGGAGCTCAAGGGTGGAATTGGAGTTTTCACCACTTCCACGAGCGGAAGGGCATTTGAATCTATTGAGATCCTTGATGACGACATTTCAATCAGAAAAGCACTAATTGTTTGCAGAGTAATAGCTGGCAGGGTTCATAGGCCACTCGACAACATTCAAGAAATGGCAGGGCAAACAGGGTTCGATTCTTTGGCGGGCAAAGTTGGTCTTTATTCAAACATAGAGGAGCTTTATTTGCTCAACCCCAAAGCCCTTCTTCCTTGCTTTGTCGTAATTTGCAAGCCCTGA 1323 0.4633 MPTVWFSLKKSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGFGGFQDGVGGVANGGGGGCGGGGNNGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSTTPPRKSPSPFLLSDKEGSALHGHGGGGGLHSSNRMSLETDSNGCSTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLPKKHPRCLADGNELLRFYGTTVACNLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEILDDDISIRKALIVCRVIAGRVHRPLDNIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03052 440 ProSitePatterns Zinc finger C2H2 type domain signature. 208 229 IPR013087 -
Accr1g03052 440 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 438 - -
Accr1g03052 440 MobiDBLite consensus disorder prediction 128 193 - -
Accr1g03052 440 FunFam C2H2-like zinc finger protein 230 439 - -
Accr1g03052 440 SUPERFAMILY ADP-ribosylation 231 439 - -
Accr1g03052 440 Gene3D - 221 439 - -
Accr1g03052 440 MobiDBLite consensus disorder prediction 151 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03052 Accr-Chr1 67391198 67392945 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03052 1 440 C2H2 Transcription Factor Family AT5G54630 67.585 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr1g03052 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03052 - - cave:132174713 705.671