Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03048 ATGGACTCGCAGCAGCTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCTTACACGCCATCTTATTCCACCATCCCATCACTACCTACAAGGTTTCTCGGATCCTTGAAATTTGACACAGGAGACTCACCCAATTCACCCTTTTCTACTCAATTTGATTCGGATTCTCTCTCTACATTGAGCGACGGTCAGGAGCAGCACGGTTCTGGGGAGATTCTTTCTGGTTTCAGCCCTTCTTATAACTCTTCTCTGGAAACTAATTATTACTTAAACAGGTCTATCTCACCTGTGGACCGTCTCCGAGACAGTCTGCATCCATATTTTGCTAAGAGGTCTCTTGCACAGGATGCAAGTTCTAGCCAAAAGATCAGGCACGCTTTGCTGGAGTTAGAGTCCGCTCTGATGGCCCCTGATGACGGTGATGTAGCTACCACATCAAATACTTCTTTGGGTGGGATTAACAAGCCTACAACTTCTGGCCAAAGGTATGGGCTTTCGAACCAGGAGCGCCAAGGGTCACAATACCTTCAAAGCCAGCCATCTTTTGCCACTAGCACTAAGCAGTCAAATGAAGTTGCACACGTTGAGAAGCGTCACAAACTGATGGAGGAAGCATGGTTCCATGGCTTCCCACCTAGCAGTTTAAAAGAATTGTTGATTGCTTGCGCCAAAGCCCTCTCTGAAAGCAACATGGAAGTCTTTGACGAGTTGATTGAAAGGGTCAAAAGTGCTGTATCTATCTGTGGCGATCCAATCCAGCGGCTTGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGAAGGAGGCATCAGGTAATAGCATATATCATGCCCTAAGGTGTCGGGAACCTGAAGGCAAAGACCTACTCTCGTACATGCACATGCTGTATGAGATTTGCCCCTACTTTAAATTTGGTTACATGGCTGCCAATGGAGCCATAGCTGAAACTTGCAGAAATGAAGACCGCATTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGGAGACACTCCTTCAAGCTCTTGCAGCAAGGCCTGGTGGGGCACCCCGTGTCCGGATCACTGGAATCGATGATCCCATCTCTCGATATGCACGTGGTGACGGCCTAGATGCAGTTGGGAACAAATTGACCGCAATCTCAGACAAATTTGGTATCCCAGTTGAGTTTCATGGAGTGCCCGTGTTTGCTTCAGAAGTTACAAGGGACATGCTTGATGTAAGGCCCGGAGAGGCTTTGGCTGTGAACTTTCCCCTGCATCTGCATCACACAGCTGATGAGAGTGTTGATGTGAACAACCCGAGGGATGAACTTCTGAGGATGGTGAAGTCACTTGGTCCCAAGGTGACCACGTTAGTGGAACAGGAATCCAACACAAACACAACGCCATTCTTCAACAGGTTCATAGAAACGCTGGACTACTACTTGGCCATGTTGGAGTCCATTGATGGCACACTGCCAAGAAATAGCAAGGATCGGATTAACGTGGAGCAGCACTGCTTGGCGAGGGACATCGTGAACGTCATTGCTTGTGAAGGGAAGGAAAGGATAGAGCGACACGAGCTGTTGGGAAAGTGGAAGTCAAGGTTGACAATGGCCGGATTCCGACAGTATCCATTGAGCTCTTACGTGAATTCTGTGATCAGAAGCCTACTTAGTTTCTATTCAGAGCGTTATACGCTGGTGGAGAAAGATGGGGCTATGTTGTTGGGGTGGAAACACAGAAATCTGATATCAGCCTCAGCCTGGCATTGA 1758 0.4795 MDSQQLFSFSVTGSGIPYTPSYSTIPSLPTRFLGSLKFDTGDSPNSPFSTQFDSDSLSTLSDGQEQHGSGEILSGFSPSYNSSLETNYYLNRSISPVDRLRDSLHPYFAKRSLAQDASSSQKIRHALLELESALMAPDDGDVATTSNTSLGGINKPTTSGQRYGLSNQERQGSQYLQSQPSFATSTKQSNEVAHVEKRHKLMEEAWFHGFPPSSLKELLIACAKALSESNMEVFDELIERVKSAVSICGDPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEICPYFKFGYMAANGAIAETCRNEDRIHIIDFQIAQGVQWETLLQALAARPGGAPRVRITGIDDPISRYARGDGLDAVGNKLTAISDKFGIPVEFHGVPVFASEVTRDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVTTLVEQESNTNTTPFFNRFIETLDYYLAMLESIDGTLPRNSKDRINVEQHCLARDIVNVIACEGKERIERHELLGKWKSRLTMAGFRQYPLSSYVNSVIRSLLSFYSERYTLVEKDGAMLLGWKHRNLISASAWH 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03048 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 176 581 IPR005202 -
Accr1g03048 585 ProSiteProfiles GRAS family profile. 206 585 IPR005202 -
Accr1g03048 585 MobiDBLite consensus disorder prediction 44 74 - -
Accr1g03048 585 MobiDBLite consensus disorder prediction 139 165 - -
Accr1g03048 585 MobiDBLite consensus disorder prediction 141 165 - -
Accr1g03048 585 Pfam GRAS domain family 215 584 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03048 Accr-Chr1 67363806 67365563 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03048 215 584 GRAS Transcription Factor Family AT5G48150 64.151 3.12e-173 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr1g03048 GRAS 8.6e-127 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03048 - - qsa:O6P43_000870 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03048 1 67363806 67365563 Accr13g00843 13 9650172 9651911 CCT
Accr1g03048 1 67363806 67365563 Accr1g03048 1 67363806 67365563 ECH