Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03034 ATGGACATTGTTTCTTTCATTACTATCGTTTTTTGCATGCTTGTCCCTTCTTTCCAAGCTTCCATGGCAGTTGATTCCATCCTTCTGTCTAATTCCTCAGTGAGTGATAGCATGAGAATAGTTTCTAAAGGTGGAAGCTTTGAACTTGGTTTCTTCAGTCCTGGAAACTCTGGTAAACACTATCTGGGAATTTGGTACAAGAACATCCCAATTCAGACTGTAGTTTGGGTAGCAAACAGAGTCAACCCAATCAAGGATTCCTCTGTCGCTGCCACCTTAACACTCAACGCCACAGGCAGCCTTGTCCTCACCCAAAATGATACTGTTATTTGGTACTCAACTTCTCTGAAACAAGTGCAAAATCCAGTGGCTGAGCTCTTAGATTCTGGAAACTTTGTGGTAAGAGATGGGGAAGACAATAATCCAGAAGCCTATTTGTGGCAAAGCTTCGACTACCCAACTGACACACTGCTCTCAGGGATGAAATTGGGATGCGACCTGAAAACAGGTTTAAATAGACGTCTAACATCTTGGAAGACTCCAGAAGATCCATCTCCAGGTGACTTTTCTATAACTGTAGACCCTCGTAACTATCTTGAATTATATATAATGAAAGGTGACTCAAAGTTCTTCAGAACTGGACCTTGGAATGGCGTGGGATTTAGTGGCTCCCCAGAACTAACTGAAAATCATATTTTTGATTTCGGGTTCGTATCTACAAAGTATGATATATACTATTATTGGCTCAGCCACAAGAATAGTTCTATTATCTCAAGGTATGTCATCAACCAAACTGAGGAAGCTCGGATTCGCTATGTGTGGTTGGAAGATGAAGAAAATTGGGAGATTTATACTCAAAAGCCAAGTGACCATTGTGACCAATATAATCTGTGTGGACAAAATGGGAAATGTGTCATCACTGGATCACCCCCTTGCCAATGCCTAAAAGGTTTCACCCCTAAGTCCCCACAGAAATGGAGCTTAGTGGACTGGTCTGATGGATGTGTCCGCAATAAACCTCTAAACTGCTCTGAAAAACACACACACAAATTTATGAAATTGGAAGGATTGAAAGTGCCAGAAACCACACATTCTTGGCTCGACAAGACATTGAATGTAGAGCAATGCAGACAGAAGTGCTCTGAAAATTGCTCTTGCACGGCCTATACTAATTCAGATATTAGAGGAGGAGGTAGTGGTTGTGCCTTATGGTTTGGTGATTTGATTGATATAAGATCTTTTGCATCTGGAGGACAGGATCTGTATGTTCGAATGCCTGCTTCAGAATTAGAATTTGGGAACAATAAAAAGTTGATAATGATCGTTGCTATCCCCATTGCTGCGATTTTATGTACGGTGTTAGTTGGGGGCTATTTCATTTACAAAGTCCGCAGGAAGAGGATTGAGAAATCAAAAAATGCACAAGTTGAAATTCAAAGCAATGAAAGAGATGATCTTGATCTCCCACTGTTTGATCTTCCAACAATAGCACAAGCCACCGAAAATTTTCAAGAGAATAACAAAATTGGACAGGGTGGATTTGGACCTGTATATTGGGGAAAGTTATTAAATGGACAAGAAATTGCTGTGAAGAAGCTTTCGAGAATATCAGAACTAGGATTGATTGAATTCAAAAATGAAGTAAAATTTATCGCCAAACTTCAACATCGGAATCTTGTAAAACTTCTTGGTTACTGCATTGAAGACGAAGAAAAGCTGTTGGTATATGAGCACATGCCAAACAAAAGTTTGGACTTCTTCATTTTTGATGAAACCAAGAGGAAGTTGTTGGATTGGTTTAAGCGCTTCCACATTATTATTGGAATTGGTCGAGGTCTTTTATATCTTCATCAAGATTCAAGGTTACGAATAATACATAGGGATTTGAAAGCAAGCAATGTTTTACTTGATGATAAGTTGATCCCAAAAATATCAGATTTTGGGCTAGCTAAGAATTTTGGAGAAGAGGAAATAGAAGGCAATACAAGAAGAGTAGTGGGCACTTATGGGTATATGGCTCCTGAATATGCAGCAGACGGGCTATATTCAATGAAATCTGATATCTTTAGTTTTGGTATATTAGTGCTGGAGATTATTTGTGGAAAGAAAAATAAAGGGTTTTATATAGAAGACTCCACGCACAACCTTGCTAGTGAGGCATGGTTACTATGGAATGAAGGGAAAGTTTTGGAATTGATTGATAAGAACATAGAGGACACGTGCAATGCATCAGAAATATTAAGGTGCATTCATGTGAGTCTGTTGTGTGTGCAACAGAATCCAGATGATAGACCCACCATAGGATCTGCAATGTTGATGCTGGAAAGTGAAGTTGCACTTCCTGAACCTAAGCAGCCTGGTTTCTTTCATGGCATGGGCCCACCCAAAGTGCACACTTTTAGCTCAAGTCAGAAGGAATGTAGCTCAACCAATGAAATGACTGTGAGCTTACTTGATGCCAGATGA 2466 0.3974 MDIVSFITIVFCMLVPSFQASMAVDSILLSNSSVSDSMRIVSKGGSFELGFFSPGNSGKHYLGIWYKNIPIQTVVWVANRVNPIKDSSVAATLTLNATGSLVLTQNDTVIWYSTSLKQVQNPVAELLDSGNFVVRDGEDNNPEAYLWQSFDYPTDTLLSGMKLGCDLKTGLNRRLTSWKTPEDPSPGDFSITVDPRNYLELYIMKGDSKFFRTGPWNGVGFSGSPELTENHIFDFGFVSTKYDIYYYWLSHKNSSIISRYVINQTEEARIRYVWLEDEENWEIYTQKPSDHCDQYNLCGQNGKCVITGSPPCQCLKGFTPKSPQKWSLVDWSDGCVRNKPLNCSEKHTHKFMKLEGLKVPETTHSWLDKTLNVEQCRQKCSENCSCTAYTNSDIRGGGSGCALWFGDLIDIRSFASGGQDLYVRMPASELEFGNNKKLIMIVAIPIAAILCTVLVGGYFIYKVRRKRIEKSKNAQVEIQSNERDDLDLPLFDLPTIAQATENFQENNKIGQGGFGPVYWGKLLNGQEIAVKKLSRISELGLIEFKNEVKFIAKLQHRNLVKLLGYCIEDEEKLLVYEHMPNKSLDFFIFDETKRKLLDWFKRFHIIIGIGRGLLYLHQDSRLRIIHRDLKASNVLLDDKLIPKISDFGLAKNFGEEEIEGNTRRVVGTYGYMAPEYAADGLYSMKSDIFSFGILVLEIICGKKNKGFYIEDSTHNLASEAWLLWNEGKVLELIDKNIEDTCNASEILRCIHVSLLCVQQNPDDRPTIGSAMLMLESEVALPEPKQPGFFHGMGPPKVHTFSSSQKECSSTNEMTVSLLDAR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03034 821 SMART serkin_6 503 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03034 821 ProSiteProfiles PAN/Apple domain profile. 343 426 IPR003609 -
Accr1g03034 821 Pfam Domain of unknown function (DUF3403) 777 821 IPR021820 GO:0004674
Accr1g03034 821 SMART ntp_6 346 425 IPR003609 -
Accr1g03034 821 CDD B_lectin 31 153 IPR001480 -
Accr1g03034 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 765 - -
Accr1g03034 821 Pfam S-locus glycoprotein domain 211 322 IPR000858 GO:0048544
Accr1g03034 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Accr1g03034 821 Gene3D - 20 150 IPR036426 -
Accr1g03034 821 CDD PAN_AP_plant 340 426 - -
Accr1g03034 821 ProSiteProfiles Protein kinase domain profile. 503 788 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03034 821 Pfam D-mannose binding lectin 73 179 IPR001480 -
Accr1g03034 821 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
Accr1g03034 821 Pfam PAN-like domain 343 411 IPR003609 -
Accr1g03034 821 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Accr1g03034 821 ProSiteProfiles EGF-like domain profile. 288 324 IPR000742 -
Accr1g03034 821 CDD EGF_CA 290 322 - -
Accr1g03034 821 Pfam Protein kinase domain 503 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03034 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 578 - -
Accr1g03034 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 342 425 - -
Accr1g03034 821 SUPERFAMILY Protein kinase-like (PK-like) 488 798 IPR011009 -
Accr1g03034 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 217 IPR036426 -
Accr1g03034 821 SMART blect_4 31 153 IPR001480 -
Accr1g03034 821 Gene3D Phosphorylase Kinase; domain 1 461 578 - -
Accr1g03034 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Accr1g03034 821 PIRSF SRK 1 821 IPR024171 GO:0004674
Accr1g03034 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03034 Accr-Chr1 67130360 67133740 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03034 439 788 Receptor kinase-like Gene Family AT4G23230 53.409 3.63e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03034 Pkinase 8.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03034 - - pcin:129316778 1112.83