Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03029 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCTCCACCAGAAACTCCACCAGGTTCGAAACTGAGGCTTCTCAATCCTCCAACTTCGCTTGGCAAGACACAGACATGTCGTCTCATCATGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCCCAACCTGCATATGATGGGTCTAGGCCTCTCTTCCCAAACTCTCGACTGGAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGGGGTGAGAGCAGTTTCTTGAACGCATCAAGCACGAATTTTCAGCAAGAAAGCGCGATGATGGGGTTGTCCCCTCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCCGAGTCCTCTTCTTCAACCAACGAGTTCAAACGAGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAGTATAGTTCTGGGGAAAGTACAGTTACAACCCAAGGCTTAGCCTCTAGTCCTAACTTTCAGATGGATTTGTATGGCAACTCATCCATATTACAAGGACTATTAGGACCCGATAACAATAATAACAGTCAAGTACAGTATGATCATCAGAATCGCCAGATTAACTTGCCATACCAGTCATCAAGCTACGGATTGAACAGTAACGATCAGTTAATGCCTCCATGGTCTAAAGTCCCTCAATTTCTGAGAGCTTCACCTCCTAAACAACAACAACCACCCCATAATAACAATAGTCAGTTGCATTTCGCAAACAACGCTCCCTTCTGGAACACTTCTGAGGCCTCCAATATTAAAGATGTTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAGGTTAGGGAGTCAAGTAGCGTGGCGAAGAAAAGTGCGAGCGAGGCAGCACCCAAAAGGCCTCGGAGCGAAACCCCATCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCAACTGCATACATCAAATTCCTTCATGAACAAGTGACAGTTTTAAGCACACCGTATATGAAAAGTGGAGCTCCAATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGAGAGGGGCGAAAGCAAGATCTGAGAAGCAGAGGGCTATGTCTGGTGCCAGTGTCGATCACATTTCCAGTGACTCAAGAAACTGCAGTTGATTTTTGGACGCCAACATTTGGAGGAACATTCAGATAA 1317 0.4662 MAEDQFQATGNWWDSASTRNSTRFETEASQSSNFAWQDTDMSSHHDLKPRSSMAASPSSSDPNPNLHMMGLGLSSQTLDWNQPSFLRGAEKGGGESSFLNASSTNFQQESAMMGLSPQVQWRDKLFSAESSSSTNEFKRGFSLDQTQFSPQYSSGESTVTTQGLASSPNFQMDLYGNSSILQGLLGPDNNNNSQVQYDHQNRQINLPYQSSSYGLNSNDQLMPPWSKVPQFLRASPPKQQQPPHNNNSQLHFANNAPFWNTSEASNIKDVRSGFFPSLQPPFPSPSFDVQSKNMCEVRESSSVAKKSASEAAPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATAYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGEGRKQDLRSRGLCLVPVSITFPVTQETAVDFWTPTFGGTFR 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03029 438 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 385 IPR036638 GO:0046983
Accr1g03029 438 CDD bHLH_AtbHLH_like 324 375 IPR045239 -
Accr1g03029 438 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
Accr1g03029 438 MobiDBLite consensus disorder prediction 1 71 - -
Accr1g03029 438 FunFam Transcription factor bHLH123 family 328 390 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 233 252 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 382 404 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 208 224 - -
Accr1g03029 438 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 135 419 - -
Accr1g03029 438 Gene3D - 328 388 IPR036638 GO:0046983
Accr1g03029 438 MobiDBLite consensus disorder prediction 298 329 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 52 71 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 1 40 - -
Accr1g03029 438 MobiDBLite consensus disorder prediction 208 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03029 Accr-Chr1 67004397 67006356 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03029 250 438 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.636 1.29e-71 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03029 - - gmx:100778697 536.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g03029 1 67004397 67006356 Accr1g03029 1 67004397 67006356 ECH