Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03028 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCTCCACCAGAAACTCCACCAGGTTCGAAACTGAGGCTTCTCAATCCTCCAACTTCGCTTGGCAAGACACAGACATGTCGTCTCATCATGACCTCAAGCCAAGGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCCCAACCTGCATATGATGGGTCTAGGCCTCTCTTCCCAAACTCTCGACTGGAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGGGGTGAGAGCAGTTTCTTGAACGCATCAAGCACGAATTTTCAGCAAGAAAGCGCGATGATGGGGTTGTCCCCTCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCCGAGTCCTCTTCTTCAACCAACGAGTTCAAACGAGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAGTATAGTTCTGGGGAAAGTACAGTTACAACCCAAGGCTTAGCCTCTAGTCCTAACTTTCAGATGGATTTGTATGGCAACTCATCCATATTACAAGGACTATTAGGACCCGATAACAATAATAACAGTCAAGTACAGTATGATCATCAGAATCGCCAGATTAACTTGCCATACCAGTCATCAAGCTACGGATTGAACAGTAACGATCAGTTAATGCCTCCATGGTCTAAAGTCCCTCAATTTCTGAGAGCTTCACCTCCTAAACAACAACAACCACCCCATAATAACAATAGTCAGTTGCATTTCGCAAACAACGCTCCCTTCTGGAACACTTCTGAGGCCTCCAATATTAAAGATGTTAGATCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCCCTTCTCCAAGCTTCGATGTTCAATCCAAGAATATGTGTGAGGTTAGGGAGTCAAGTAGCGTGGCGAAGAAAAGTGCGAGCGAGGCAGCACCCAAAAGGCCTCGGAGCGAAACCCCATCTCCTTTGCCAGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCGCTTCAACAATTGGTTTCGCCTTTCGGAAAGACCGATACAGCCTCGGTGCTCTCTGAAGCAACTGCATACATCAAATTCCTTCATGAACAAGTTTTAAGCACACCGTATATGAAAAGTGGAGCTCCAATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGAGAGGGGCGAAAGCAAGATCTGAGAAGCAGAGGGCTATGTCTGGTGCCAGTGTCGATCACATTTCCAGTGACTCAAGAAACTGCAGTTGATTTTTGGACGCCAACATTTGGAGGAACATTCAGATAA 1311 0.4661 MAEDQFQATGNWWDSASTRNSTRFETEASQSSNFAWQDTDMSSHHDLKPRSSMAASPSSSDPNPNLHMMGLGLSSQTLDWNQPSFLRGAEKGGGESSFLNASSTNFQQESAMMGLSPQVQWRDKLFSAESSSSTNEFKRGFSLDQTQFSPQYSSGESTVTTQGLASSPNFQMDLYGNSSILQGLLGPDNNNNSQVQYDHQNRQINLPYQSSSYGLNSNDQLMPPWSKVPQFLRASPPKQQQPPHNNNSQLHFANNAPFWNTSEASNIKDVRSGFFPSLQPPFPSPSFDVQSKNMCEVRESSSVAKKSASEAAPKRPRSETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEATAYIKFLHEQVLSTPYMKSGAPIQHQQSPGKSKEGEGRKQDLRSRGLCLVPVSITFPVTQETAVDFWTPTFGGTFR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03028 436 Gene3D - 328 374 IPR036638 GO:0046983
Accr1g03028 436 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 318 367 IPR011598 GO:0046983
Accr1g03028 436 FunFam Transcription factor bHLH123 family 328 388 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 380 402 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 1 71 - -
Accr1g03028 436 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 328 375 IPR036638 GO:0046983
Accr1g03028 436 CDD bHLH_AtbHLH_like 324 371 IPR045239 -
Accr1g03028 436 MobiDBLite consensus disorder prediction 233 252 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 208 224 - -
Accr1g03028 436 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 135 417 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 298 329 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 52 71 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 1 40 - -
Accr1g03028 436 MobiDBLite consensus disorder prediction 208 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03028 Accr-Chr1 67004397 67006356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03028 250 436 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 63.636 1.47e-69 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03028 - - gmx:100778697 529.25