Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03025 ATGACAAGCCTTTCTTATGTGCTCTCCGTTGCCCAGTTTTTATTTGTGCTCTTTGATACTTCAAGTGCAGCCGATTACCTGACCCAATCCCAGTCAATTTCTGGTGGTAAGACCCTAGTTTCTGGAGATGGAAGTTTTGAATTGGGTTTCTTCAGTCCAGGTAGTTCAGAAAAGCTCTACTTGGGAATATGGTACAAGAACATCCCTGTCAAAACTGTTGTGTGGGTCGCCAATCGAGAAAATCCAATCAAAGAGAAGTCTGGCATGTTGAGATTAGACAGTGAGGGAAACCTCGTGCTTCTCAATCAAAACGACACTGTTGTTTGGTCAGCAAATTCCCGAAGAAAGGTCCTGAACCCAATTGTTCAACTTCTTGGTTCTGGAAATCTAGTATTTAGAGATGAGAAAGACGAGAATCCAGAAAATTACTTGTGGCAGAGCTTTGACTACCCTTCTGATACATTGCTGCCTGGAATGAAGTTAGGGTGGAATCTAAAAACTGGTCTGAACAGGACTCTATCTTCTTGGAAGAATTGGGATGACCCTTCTTCCGGAGACTTCACCTGGGGACTTGTACATAATGGTTACGCCGAAGTGGTGATGTGGAAGGGTTCATCAGAGTACTACAGAAGTGGACCCTGGAATGGCCTTAGGTTCGATGGTGCCCCAGAATTAAGGAACAATCCTCTTTTTGGGTATGATTTTGTCTCCACTGAGGATCAGTTGTATTACACTTACTACCTCAAGAATGAGTCAATGATTTCAAGAATTGTCCTGAACCAAACCATTTATTCTCGGCAGCGCTTCATATGGATAGAAGAAGCTCAAAGTTGGAGGCTTTATGCATCTGTTCCCAGAGACAATTGCGATGACTATAATCTTTGTGGTCCTTATGGGAATTGTGTCATGGGTGAGTCTCCAGTCTGCCAGTGTTTAAGTGGGTTTGAGCCTAAATCACCACAGAACTGGGATATGATGGACTGGACTCAAGGGTGTGTACGCAGTCAACAAGTGAGCTGCGACGACAAGAATAAAGGAGGATTTAATAAATTTAATGGGCTGAAATATCCTGATTCTACGCATTCTTGGGTCAATAGGAGTTTGAATCTTCAAGAATGTATGGAGAACTGCTTGGGAAACTGTTCCTGTACAGCTTATGCAAACTCAGATATCAGAGGAGGAGGCAGTGGATGTATTTTGTGGTTTGGTGACCTCAAGGATATTAGACAGATTTCTGGCGATAATCGGGATCTATATATCCGGATGAAAACTTCTGAGATAGCTGTGAAAGGTGGACATAAGATGAAGGTGGCTGCGATTATCATCATTGTTGCCTCAGTTGTTGTGATAATTTTGATTTTCCTCTACATTGGCAAGACCTTGAAATTGTTTACAGAGGAAACAGAGGACAACCTCATGACACGGTATGATGATGAAGACGAACAAGAAGATTTGGAGCTTCCTTTCCTTGACCTCCCCACAATTGTCAAAGCAACTGATGACTTCTCAATCAGCAAGAAACTTGGACAAGGTGGATTTGGGGCTGTATACAGAGGTATGCTTGTGGATGGAAAAGAAATTGCAGTGAAGAGGCTTTCACAAAGTTCTGGACAAGGGTTGAATGAATTCAAGAACGAAGTCATATTGATTTCCAAGCTACAACATCGAAATCTCGTTAAACTTCTTGGTTGTTGCATCCAAGGAGAGGAGAAAATGCTTGTCTACGAGTACATGCCCAATAGAAGCTTGGACTCTTTCATTTTTGATCATGTAAAACGTAAGATTCTAGATTGGCCTAAGCGCTTCAACATTGTTTGTGGAATTGCTCGAGGGCTTTTGTATCTTCATCAAGATTCTAGGTTGAGGATCATACATAGGGATCTTAAAGCAAGTAATATTTTACTTGACAACGAATTAAATCCAAAAATTTCAGATTTTGGCATGGCCAAAACTTTTGGAGGAGATCAAACCGAAGGAAATACTAATAGAGTAGTTGGAACATATGGCTACATGGCACCTGAATATGCTATTCATGGGCTATTCTCAATAAAATCAGACGTCTTTAGTTTTGGTGTATTGTTACTAGAGCTAGTAAGCGGAAAAAAGAACAGAGAATTTTCCCATTCAAACATGAGTCATAACCTTATTGGGCATGCATGGAGACTTTGGAAAGAAGGCAGACCTTTAGAGTTAATAGATCCATGCTTGGATGATCTATTTGATCTATCTGAAGCAATGCGTTGCATCCATATCAGCCTTTTATGTCTGCAACAACATCCCGAAGATAGACCAAGTATGTCTAATGTGGTTGTTATGTTAAGCAGTGAGAGTGTCTTACCCGATCCTACAGAGCCTGCTTACATCATAGAGAAGAAATTTCCAGAAACAGACTCTTCTGGCAAGCATCAGTTTTCTTCAACTAATGAAATAACTGTTACCATGTTACAGCCTCGATAG 2457 0.4111 MTSLSYVLSVAQFLFVLFDTSSAADYLTQSQSISGGKTLVSGDGSFELGFFSPGSSEKLYLGIWYKNIPVKTVVWVANRENPIKEKSGMLRLDSEGNLVLLNQNDTVVWSANSRRKVLNPIVQLLGSGNLVFRDEKDENPENYLWQSFDYPSDTLLPGMKLGWNLKTGLNRTLSSWKNWDDPSSGDFTWGLVHNGYAEVVMWKGSSEYYRSGPWNGLRFDGAPELRNNPLFGYDFVSTEDQLYYTYYLKNESMISRIVLNQTIYSRQRFIWIEEAQSWRLYASVPRDNCDDYNLCGPYGNCVMGESPVCQCLSGFEPKSPQNWDMMDWTQGCVRSQQVSCDDKNKGGFNKFNGLKYPDSTHSWVNRSLNLQECMENCLGNCSCTAYANSDIRGGGSGCILWFGDLKDIRQISGDNRDLYIRMKTSEIAVKGGHKMKVAAIIIIVASVVVIILIFLYIGKTLKLFTEETEDNLMTRYDDEDEQEDLELPFLDLPTIVKATDDFSISKKLGQGGFGAVYRGMLVDGKEIAVKRLSQSSGQGLNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYMPNRSLDSFIFDHVKRKILDWPKRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLELVSGKKNREFSHSNMSHNLIGHAWRLWKEGRPLELIDPCLDDLFDLSEAMRCIHISLLCLQQHPEDRPSMSNVVVMLSSESVLPDPTEPAYIIEKKFPETDSSGKHQFSSTNEITVTMLQPR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03025 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Accr1g03025 818 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03025 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 577 - -
Accr1g03025 818 CDD B_lectin 30 151 IPR001480 -
Accr1g03025 818 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Accr1g03025 818 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Accr1g03025 818 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Accr1g03025 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Accr1g03025 818 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Accr1g03025 818 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03025 818 Pfam Protein tyrosine and serine/threonine kinase 503 772 IPR001245 GO:0004672|GO:0006468
Accr1g03025 818 SUPERFAMILY Protein kinase-like (PK-like) 486 802 IPR011009 -
Accr1g03025 818 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Accr1g03025 818 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Accr1g03025 818 Pfam Domain of unknown function (DUF3403) 774 818 IPR021820 GO:0004674
Accr1g03025 818 Pfam D-mannose binding lectin 72 177 IPR001480 -
Accr1g03025 818 SMART blect_4 30 151 IPR001480 -
Accr1g03025 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Accr1g03025 818 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Accr1g03025 818 CDD STKc_IRAK 508 773 - -
Accr1g03025 818 SMART ntp_6 343 422 IPR003609 -
Accr1g03025 818 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 764 - -
Accr1g03025 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Accr1g03025 818 CDD PAN_AP_plant 336 421 - -
Accr1g03025 818 Gene3D - 19 148 IPR036426 -
Accr1g03025 818 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Accr1g03025 818 Pfam PAN-like domain 340 408 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03025 Accr-Chr1 66979507 66983198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03025 442 790 Receptor kinase-like Gene Family AT4G23230 54.674 3.36e-132 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03025 PK_Tyr_Ser-Thr 7.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03025 - - jre:109013535 1111.29