Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03024 ATGGAGCTTCGACATTGGCAATTGATGACAAGCCTTTCTTATGTGCTCTCCGTTGCCCAGTTTTTATTTGTGCTCTTTGATACTTCAAGTGCAGCCGATTACCTGACCCAATCCCAGTCAATTTCTGGTGGTAAGACCCTAGTTTCTGGAGATGGAAGTTTTGAATTGGGTTTCTTCAGTCCAGGTAGTTCAGAAAAGCTCTACTTGGGAATATGGTACAAGAACATCCCTGTCAAAACTGTTGTGTGGGTCGCCAATCGAGAAAATCCAATCAAAGAGAAGTCTGGCATGTTGAGATTAGACAGTGAGGGAAACCTCGTGCTTCTCAATCAAAACGACACTGTTGTTTGGTCAGCAAATTCCCGAAGAAAGGTCCTGAACCCAATTGTTCAACTTCTTGGTTCTGGAAATCTAGTATTTAGAGATGAGAAAGACGAGAATCCAGAAAATTACTTGTGGCAGAGCTTTGACTACCCTTCTGATACATTGCTGCCTGGAATGAAGTTAGGGTGGAATCTAAAAACTGGTCTGAACAGGACTCTATCTTCTTGGAAGAATTGGGATGACCCTTCTTCCGGAGACTTCACCTGGGGACTTGTACATAATGGTTACGCCGAAGTGGTGATGTGGAAGGGTTCATCAGAGTACTACAGAAGTGGACCCTGGAATGGCCTTAGGTTCGATGGTGCCCCAGAATTAAGGAACAATCCTCTTTTTGGGTATGATTTTGTCTCCACTGAGGATCAGTTGTATTACACTTACTACCTCAAGAATGAGTCAATGATTTCAAGAATTGTCCTGAACCAAACCATTTATTCTCGGCAGCGCTTCATATGGATAGAAGAAGCTCAAAGTTGGAGGCTTTATGCATCTGTTCCCAGAGACAATTGCGATGACTATAATCTTTGTGGTCCTTATGGGAATTGTGTCATGGGTGAGTCTCCAGTCTGCCAGTGTTTAAGTGGGTTTGAGCCTAAATCACCACAGAACTGGGATATGATGGACTGGACTCAAGGGTGTGTACGCAGTCAACAAGTGAGCTGCGACGACAAGAATAAAGGAGGATTTAATAAATTTAATGGGCTGAAATATCCTGATTCTACGCATTCTTGGGTCAATAGGAGTTTGAATCTTCAAGAATGTATGGAGAACTGCTTGGGAAACTGTTCCTGTACAGCTTATGCAAACTCAGATATCAGAGGAGGAGGCAGTGGATGTATTTTGTGGTTTGGTGACCTCAAGGATATTAGACAGATTTCTGGCGATAATCGGGATCTATATATCCGGATGAAAACTTCTGAGATAGCTGTGAAAGGTGGACATAAGATGAAGGTGGCTGCGATTATCATCATTGTTGCCTCAGTTGTTGTGATAATTTTGATTTTCCTCTACATTGGCAAGACCTTGAAATTGTTTACAGAGGAAACAGAGGACAACCTCATGACACGGTATGATGATGAAGACGAACAAGAAGATTTGGAGCTTCCTTTCCTTGACCTCCCCACAATTGTCAAAGCAACTGATGACTTCTCAATCAGCAAGAAACTTGGACAAGGTGGATTTGGGGCTGTATACAGAGGTATGCTTGTGGATGGAAAAGAAATTGCAGTGAAGAGGCTTTCACAAAGTTCTGGACAAGGGTTGAATGAATTCAAGAACGAAGTCATATTGATTTCCAAGCTACAACATCGAAATCTCGTTAAACTTCTTGGTTGTTGCATCCAAGGAGAGGAGAAAATGCTTGTCTACGAGTACATGCCCAATAGAAGCTTGGACTCTTTCATTTTTGATCATGTAAAACGTAAGATTCTAGATTGGCCTAAGCGCTTCAACATTGTTTGTGGAATTGCTCGAGGGCTTTTGTATCTTCATCAAGATTCTAGGTTGAGGATCATACATAGGGATCTTAAAGCAAGTAATATTTTACTTGACAACGAATTAAATCCAAAAATTTCAGATTTTGGCATGGCCAAAACTTTTGGAGGAGATCAAACCGAAGGAAATACTAATAGAGTAGTTGGAACATATGGCTACATGGCACCTGAATATGCTATTCATGGGCTATTCTCAATAAAATCAGACGTCTTTAGTTTTGGTGTATTGTTACTAGAGCTAGTAAGCGGAAAAAAGAACAGAGAATTTTCCCATTCAAACATGAGTCATAACCTTATTGGGCATGCATGGAGACTTTGGAAAGAAGGCAGACCTTTAGAGTTAATAGATCCATGCTTGGATGATCTATTTGATCTATCTGAAGCAATGCGTTGCATCCATATCAGCCTTTTATGTCTGCAACAACATCCCGAAGATAGACCAAGTATGTCTAATGTGGTTGTTATGTTAAGCAGTGAGAGTGTCTTACCCGATCCTACAGAGCCTGCTTACATCATAGAGAAGAAATTTCCAGAAACAGACTCTTCTGGCAAGCATCAGTTTTCTTCAACTAATGAAATAACTGTTACCATGTTACAGCCTCGATAG 2481 0.4115 MELRHWQLMTSLSYVLSVAQFLFVLFDTSSAADYLTQSQSISGGKTLVSGDGSFELGFFSPGSSEKLYLGIWYKNIPVKTVVWVANRENPIKEKSGMLRLDSEGNLVLLNQNDTVVWSANSRRKVLNPIVQLLGSGNLVFRDEKDENPENYLWQSFDYPSDTLLPGMKLGWNLKTGLNRTLSSWKNWDDPSSGDFTWGLVHNGYAEVVMWKGSSEYYRSGPWNGLRFDGAPELRNNPLFGYDFVSTEDQLYYTYYLKNESMISRIVLNQTIYSRQRFIWIEEAQSWRLYASVPRDNCDDYNLCGPYGNCVMGESPVCQCLSGFEPKSPQNWDMMDWTQGCVRSQQVSCDDKNKGGFNKFNGLKYPDSTHSWVNRSLNLQECMENCLGNCSCTAYANSDIRGGGSGCILWFGDLKDIRQISGDNRDLYIRMKTSEIAVKGGHKMKVAAIIIIVASVVVIILIFLYIGKTLKLFTEETEDNLMTRYDDEDEQEDLELPFLDLPTIVKATDDFSISKKLGQGGFGAVYRGMLVDGKEIAVKRLSQSSGQGLNEFKNEVILISKLQHRNLVKLLGCCIQGEEKMLVYEYMPNRSLDSFIFDHVKRKILDWPKRFNIVCGIARGLLYLHQDSRLRIIHRDLKASNILLDNELNPKISDFGMAKTFGGDQTEGNTNRVVGTYGYMAPEYAIHGLFSIKSDVFSFGVLLLELVSGKKNREFSHSNMSHNLIGHAWRLWKEGRPLELIDPCLDDLFDLSEAMRCIHISLLCLQQHPEDRPSMSNVVVMLSSESVLPDPTEPAYIIEKKFPETDSSGKHQFSSTNEITVTMLQPR 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03024 826 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Accr1g03024 826 SUPERFAMILY Protein kinase-like (PK-like) 494 810 IPR011009 -
Accr1g03024 826 PIRSF SRK 4 826 IPR024171 GO:0004674
Accr1g03024 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 586 789 - -
Accr1g03024 826 Pfam D-mannose binding lectin 80 185 IPR001480 -
Accr1g03024 826 Pfam Protein tyrosine and serine/threonine kinase 511 780 IPR001245 GO:0004672|GO:0006468
Accr1g03024 826 ProSiteProfiles Bulb-type lectin domain profile. 32 153 IPR001480 -
Accr1g03024 826 Pfam S-locus glycoprotein domain 217 327 IPR000858 GO:0048544
Accr1g03024 826 ProSitePatterns Protein kinases ATP-binding region signature. 516 538 IPR017441 GO:0005524
Accr1g03024 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 585 - -
Accr1g03024 826 SMART ntp_6 351 430 IPR003609 -
Accr1g03024 826 ProSiteProfiles EGF-like domain profile. 293 329 IPR000742 -
Accr1g03024 826 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 190 IPR036426 -
Accr1g03024 826 Gene3D Transferase(Phosphotransferase) domain 1 586 788 - -
Accr1g03024 826 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 28 156 - -
Accr1g03024 826 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 22 772 - -
Accr1g03024 826 ProSiteProfiles PAN/Apple domain profile. 348 432 IPR003609 -
Accr1g03024 826 ProSiteProfiles Protein kinase domain profile. 510 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03024 826 CDD PAN_AP_plant 344 429 - -
Accr1g03024 826 SMART blect_4 38 159 IPR001480 -
Accr1g03024 826 Gene3D Phosphorylase Kinase; domain 1 473 585 - -
Accr1g03024 826 Pfam PAN-like domain 348 416 IPR003609 -
Accr1g03024 826 Pfam Domain of unknown function (DUF3403) 782 826 IPR021820 GO:0004674
Accr1g03024 826 Gene3D - 27 156 IPR036426 -
Accr1g03024 826 CDD B_lectin 38 159 IPR001480 -
Accr1g03024 826 SMART serkin_6 510 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03024 826 CDD STKc_IRAK 516 781 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03024 Accr-Chr1 66979483 66983198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03024 450 798 Receptor kinase-like Gene Family AT4G23230 54.674 4.34e-132 406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03024 PK_Tyr_Ser-Thr 7.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03024 - - jre:109013535 1111.29