Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03021 ATGTCGTCCACGCTGGACATGATAACCCCAAGCCACCCCCTGCGTGATGGCCACAATGAAACTCTGATTTCAGAAGGACGAATCTTCGAAGCTGGATTCTTCAACCCTGTAGATTCAAAGAGGCGTTACGTGGGAATTTGGTACAGGAATATCCCCGAAAAAACGGTCGTATGGGTGGCCAACAGAGAAAAACCACTCCACGATGCCTCGGGAGTGTTACAGATCGACAGTGATAAAGGAATTCTTAGAATCTTGGACAGCAAAGGGGTCGAAACTTGGTCCTCGAATAATGCATCAAAACAATTAGCAGATAACCCAGTCTTGCAGCTGTTGGATTCAGGAAACCTGGTTCTGAGACATGCAAAGAACATGAGGAGCATATTATGGCAGAGCTTTGATTATCCAGGCGACACTTTTCTTCCAGGAATGAAAATCAGAAGCAGCATAAAGACAGGTCAGTATATAGGAATAACTTCTTGGAAATCCTTGCAAGATCCTTCACCTGGTAAGTATTCCATGCACATAGATACCAAAGGCCTCCCTCAGCTAGTCATTACAGAGGAAAACAGAGTAGTATACAGACCAGGACCGTGGAATGGGCTTGGTTTTACAGGTACCCCAGAACTGAGAAATATCAAATTCATGAAATTACTTTATGGGTTGAGTGAAGATGAAGTCTTTTATGAATATTCTATCCTAGATAATTCCACACTAATGAGAAGCAGACTAGTACCAGCAGGCTTTCCACTACGTTTTGCATGGTCTGCTCAGACAAATCGTTGGGACAATATCCAGTCCAGCCCGTTCGACCAGTGTGAAACTTACGATTTCTGTGGTCCAAATGCTAACTGCAGCTCTGGTCGGAGTTGCGAGTGCTTGACAGGAATCAAACCAAATTCGTCTGGTGGGTGTTTGCGAACAACTCCACTTGAATGTAGAGAGGGGGATAGATTTGAAAAGCATCAGGGAATGAAATTACCAGACACGTCTTCTTCGAGGTACAATAAGACCATAAGCTTAGGCGAATGTGAAGAACTGTGTCTGAGAAACTGCTGTTGCACGGCATATTCTAATTTGGATATTAGTAACGGAGGAAGTGGCTGCTTGCATTGGTTTGATAACATTGTCGACTTGAGACAACTCGCAGAGGGAGGACAAGACTTTTATGTACGAGTATATGCTGCTTCAGGCCCAGCTAAAAATGGCATGGACAAGAGGAAGCTTGCAGGTATTGCGATCGGCTGCGCTTTATTAATCACGAGCATGGTAATAATCGGATTCACTATTAAGAAGAAGCTCATGCATCCAGGGAAAGCAATTTATTGGAAGGACAAGAGTGGCCAAGAAAATGTTGATTTACCAATATTTGAATTTTCAACCATTTCCAATGCCATGAATCAATTTTCAAAGATGAATAAATTGGGACAGGGTGGTTTTGGACCAGTGTACAAGGGCATATTAGTAGATGGACAAGAAATTGCGGTAAAGAGGCTTTCCAAAACATCAAGACAAGGAATGGATGAGTTTAAAAATGAAGTATTGTTGATTGCAAAACTCCAACACGGCAATCTTGTAAAGCTTCTTGGTTGCTAG 1593 0.4281 MSSTLDMITPSHPLRDGHNETLISEGRIFEAGFFNPVDSKRRYVGIWYRNIPEKTVVWVANREKPLHDASGVLQIDSDKGILRILDSKGVETWSSNNASKQLADNPVLQLLDSGNLVLRHAKNMRSILWQSFDYPGDTFLPGMKIRSSIKTGQYIGITSWKSLQDPSPGKYSMHIDTKGLPQLVITEENRVVYRPGPWNGLGFTGTPELRNIKFMKLLYGLSEDEVFYEYSILDNSTLMRSRLVPAGFPLRFAWSAQTNRWDNIQSSPFDQCETYDFCGPNANCSSGRSCECLTGIKPNSSGGCLRTTPLECREGDRFEKHQGMKLPDTSSSRYNKTISLGECEELCLRNCCCTAYSNLDISNGGSGCLHWFDNIVDLRQLAEGGQDFYVRVYAASGPAKNGMDKRKLAGIAIGCALLITSMVIIGFTIKKKLMHPGKAIYWKDKSGQENVDLPIFEFSTISNAMNQFSKMNKLGQGGFGPVYKGILVDGQEIAVKRLSKTSRQGMDEFKNEVLLIAKLQHGNLVKLLGC 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03021 530 Pfam Protein kinase domain 468 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03021 530 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 530 - -
Accr1g03021 530 CDD PAN_AP_plant 308 392 - -
Accr1g03021 530 Gene3D Phosphorylase Kinase; domain 1 442 530 - -
Accr1g03021 530 ProSiteProfiles Protein kinase domain profile. 468 530 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03021 530 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1 132 - -
Accr1g03021 530 Pfam D-mannose binding lectin 55 161 IPR001480 -
Accr1g03021 530 SMART blect_4 11 135 IPR001480 -
Accr1g03021 530 Gene3D - 2 132 IPR036426 -
Accr1g03021 530 Pfam S-locus glycoprotein domain 193 299 IPR000858 GO:0048544
Accr1g03021 530 ProSiteProfiles Bulb-type lectin domain profile. 5 131 IPR001480 -
Accr1g03021 530 SUPERFAMILY alpha-D-mannose-specific plant lectins 56 166 IPR036426 -
Accr1g03021 530 CDD B_lectin 19 135 IPR001480 -
Accr1g03021 530 SMART ntp_6 313 392 IPR003609 -
Accr1g03021 530 ProSiteProfiles PAN/Apple domain profile. 312 393 IPR003609 -
Accr1g03021 530 Pfam PAN-like domain 312 378 IPR003609 -
Accr1g03021 530 Gene3D Hepatocyte Growth Factor 309 394 - -
Accr1g03021 530 FunFam Os08g0179000 protein 441 530 - -
Accr1g03021 530 SUPERFAMILY Protein kinase-like (PK-like) 453 530 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03021 Accr-Chr1 66947562 66950222 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03021 338 529 Receptor kinase-like Gene Family AT4G23190 35.377 3.02e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03021 S_locus_glycop 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03021 - - gmx:100802416 600.127