Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03020 ATGGAAAACTTGAGAAAGCTTTCTGTGTATTTTTTGTTACTATGCTTCACAAGTATGTCGTCCACGCTGGACATGATAACCCCAAGCCACCCCCTGCGTGATGGCCACAATGAAACTCTGATTTCAGAAGGACGAATCTTCGAAGCTGGATTCTTCAACCCTGTAGATTCAAAGAGGCGTTACGTGGGAATTTGGTACAGGAATATCCCCGAAAAAACGGTCGTATGGGTGGCCAACAGAGAAAAACCACTCCACGATGCCTCGGGAGTGTTACAGATCGACAGTGATAAAGGAATTCTTAGAATCTTGGACAGCAAAGGGGTCGAAACTTGGTCCTCGAATAATGCATCAAAACAATTAGCAGATAACCCAGTCTTGCAGCTGTTGGATTCAGGAAACCTGGTTCTGAGACATGCAAAGAACATGAGGAGCATATTATGGCAGAGCTTTGATTATCCAGGCGACACTTTTCTTCCAGGAATGAAAATCAGAAGCAGCATAAAGACAGGTCAGTATATAGGAATAACTTCTTGGAAATCCTTGCAAGATCCTTCACCTGGTAAGTATTCCATGCACATAGATACCAAAGGCCTCCCTCAGCTAGTCATTACAGAGGAAAACAGAGTAGTATACAGACCAGGACCGTGGAATGGGCTTGGTTTTACAGGTACCCCAGAACTGAGAAATATCAAATTCATGAAATTACTTTATGGGTTGAGTGAAGATGAAGTCTTTTATGAATATTCTATCCTAGATAATTCCACACTAATGAGAAGCAGACTAGTACCAGCAGGCTTTCCACTACGTTTTGCATGGTCTGCTCAGACAAATCGTTGGGACAATATCCAGTCCAGCCCGTTCGACCAGTGTGAAACTTACGATTTCTGTGGTCCAAATGCTAACTGCAGCTCTGGTCGGAGTTGCGAGTGCTTGACAGGAATCAAACCAAATTCGTCTGGTGGGTGTTTGCGAACAACTCCACTTGAATGTAGAGAGGGGGATAGATTTGAAAAGCATCAGGGAATGAAATTACCAGACACGTCTTCTTCGAGGTACAATAAGACCATAAGCTTAGGCGAATGTGAAGAACTGTGTCTGAGAAACTGCTGTTGCACGGCATATTCTAATTTGGATATTAGTAACGGAGGAAGTGGCTGCTTGCATTGGTTTGATAACATTGTCGACTTGAGACAACTCGCAGAGGGAGGACAAGACTTTTATGTACGAGTATATGCTGCTTCAGGCCCAGCTAAAAATGGCATGGACAAGAGGAAGCTTGCAGGTATTGCGATCGGCTGCGCTTTATTAATCACGAGCATGGTAATAATCGGATTCACTATTAAGAAGAAGCTCATGCATCCAGGGAAAGCAATTTATTGGAAGGACAAGAGTGGCCAAGAAAATGTTGATTTACCAATATTTGAATTTTCAACCATTTCCAATGCCATGAATCAATTTTCAAAGATGAATAAATTGGGACAGGGTGGTTTTGGACCAGTGTACAAGGGCATATTAGTAGATGGACAAGAAATTGCGGTAAAGAGGCTTTCCAAAACATCAAGACAAGGAATGGATGAGTTTAAAAATGAAGTATTGTTGATTGCAAAACTCCAACACGGCAATCTTGTAAAGCTTCTTGGTTGCTAG 1647 0.4244 MENLRKLSVYFLLLCFTSMSSTLDMITPSHPLRDGHNETLISEGRIFEAGFFNPVDSKRRYVGIWYRNIPEKTVVWVANREKPLHDASGVLQIDSDKGILRILDSKGVETWSSNNASKQLADNPVLQLLDSGNLVLRHAKNMRSILWQSFDYPGDTFLPGMKIRSSIKTGQYIGITSWKSLQDPSPGKYSMHIDTKGLPQLVITEENRVVYRPGPWNGLGFTGTPELRNIKFMKLLYGLSEDEVFYEYSILDNSTLMRSRLVPAGFPLRFAWSAQTNRWDNIQSSPFDQCETYDFCGPNANCSSGRSCECLTGIKPNSSGGCLRTTPLECREGDRFEKHQGMKLPDTSSSRYNKTISLGECEELCLRNCCCTAYSNLDISNGGSGCLHWFDNIVDLRQLAEGGQDFYVRVYAASGPAKNGMDKRKLAGIAIGCALLITSMVIIGFTIKKKLMHPGKAIYWKDKSGQENVDLPIFEFSTISNAMNQFSKMNKLGQGGFGPVYKGILVDGQEIAVKRLSKTSRQGMDEFKNEVLLIAKLQHGNLVKLLGC 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03020 548 ProSiteProfiles Protein kinase domain profile. 486 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03020 548 SMART ntp_6 331 410 IPR003609 -
Accr1g03020 548 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 184 IPR036426 -
Accr1g03020 548 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Accr1g03020 548 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 548 - -
Accr1g03020 548 CDD PAN_AP_plant 326 410 - -
Accr1g03020 548 Pfam PAN-like domain 330 396 IPR003609 -
Accr1g03020 548 CDD B_lectin 37 153 IPR001480 -
Accr1g03020 548 SMART blect_4 29 153 IPR001480 -
Accr1g03020 548 Pfam D-mannose binding lectin 73 179 IPR001480 -
Accr1g03020 548 Pfam S-locus glycoprotein domain 211 317 IPR000858 GO:0048544
Accr1g03020 548 ProSiteProfiles Bulb-type lectin domain profile. 23 149 IPR001480 -
Accr1g03020 548 Gene3D Phosphorylase Kinase; domain 1 460 548 - -
Accr1g03020 548 FunFam Os08g0179000 protein 459 548 - -
Accr1g03020 548 Pfam Protein kinase domain 486 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03020 548 Gene3D - 18 150 IPR036426 -
Accr1g03020 548 ProSiteProfiles PAN/Apple domain profile. 330 411 IPR003609 -
Accr1g03020 548 Gene3D Hepatocyte Growth Factor 327 412 - -
Accr1g03020 548 SUPERFAMILY Protein kinase-like (PK-like) 471 548 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03020 Accr-Chr1 66947508 66950222 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03020 356 547 Receptor kinase-like Gene Family AT4G23190 35.377 3.18e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03020 S_locus_glycop 1.7e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03020 - - gmx:100802416 609.372