Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03009 ATGAAGAATTTTACCGTGCTGCCTATATGCGTTGTTTTACTCTTCATAAGAACTTCCACTTCATTAGACAGTATCACTCAAAGCGCGCCTTTAAGAGATGGTGAGACCTTAGTTTCAAGTGGAGGAGTATTTGAGATGGGGTTTTTCAGTCCTGGAAAATCGAATAACCGCTACTTGGGTATATGGTACATGCATATTTCTCCTTTGACGGTGGTATGGGTGGCCAATAGAGAAGCTCCAATTAGTGATGGCTCAGGAATTTTAGTAACAAACGATCAAGGAATTCTTGCCCTGGTTGATAGCACAAATAGGACTGTTTGGTCGTCCAGCAGTTCTATAATAGCAGAGAAGCCAATTGTACGGCTCTTGGACACAGGAAATCTTATTATTAGTGACCAAAAATACAGTAAGGACCACTTCATATGGCAGAGTTTTGATTATCCCTGTGATACCTTATTGCCAGGAATGAAGCTTGGATTTAACCTTGTCACTGGTCTGAATAGGTTTCTATCTTCTTGGAGGAGTCCAGATGATCCTGGTCAAGGGGAAAATGTACTGAAGTTAGAGCGTCGAGGGTATCCACAATCATTTCAATTCAGGAGAAATGTCATACATTTCAGAGCAGGATCGTGGAATGGCCTTTATTTTACTGGATATCCAGTTCAAAAACAAAATCCAGTGTACAAGGCTAAGTTTGTTTTTAATGATAAAGAAGCATATTATGAGTATGAACTCGTGAATAGTTCAGTTTACTCCAGAATTGTAATGTCTCCTTCAGGCATTGGGAAGCGTTTAGTATGGAGTAATCAAAGAGGCATATGGGAGATTATCTCAGCTAACTTGGCAGATCAATGTGACAATTATGGCTTGTGTGGGGCATACTCTCTCTGCGATTTTAGCAGCTCCAGGGTATGTCATTGCTTAAAAGGATTTGTACCCAGAAATGTGGAACAGTGGAATATATCAGATTGGTCTGGTGGGTGTGTTCGAAAGGCTCTATTGGATTGTAATAGTTTAGATAGCTTCCGGAAGTATAGAGGTGTGAAATTGCCAGACACATCATCTTCCCGGTTCAACAAGACCATGAGCCTTGAGGAATGTAGGCAATCATGTCTGAGAAACTGTTCTTGTACAGCATATGCAAATTTGGATATCCGTGATGGAGGAAGTGGCTGCTTAGTTTGGTTTAAAGATCTGATTGACATGAAGCAATTACCGCAAGGAGGACAAGACATTTTTATTCGTGTCCCTGCTTCAGAACTAGACTTTTTTGAGGAAAAACGCTATTGGAACAACAATAAGAGAAAGCTCATAGGAATCACAGTTGGTTCTATTACAATAAACATGAGCGTGATACTCATAGTTTTTGGATTGATTAGATGTGCAAGGAAAAGTAAACTCAAAAGGTCAGGGAAAACAAAAATATATTATAGCAGGAATCCTTGTTACAATGACTTAAGAATGGAAGACACAGAAATACAAATATTTGATTTGTCAGTCATAGTTAAAGCCACTAATAATTTTTCAAACATCAATAAATTGGGAGAAGGGGGCTTCGGATCAGTCTACAAGGGTACTTTGGGACATGGACAAGAATTAGCTGTGAAAAGGCTATCTGAGTATTCTATTCAAGGTTTGGAAGAGTTTAAAAATGAAGTTTTGTTGATTGCTAAACTTCAACATCGTAACCTTGTGAAGCTTCTTGGTTGCTGCATTGAAAGAGAAGAAAAATTGTTGATCTATGAATACATGCCAAACAAAAGTCTGGACCAATTTATTTTTGATGAAATTAGAAGCAAGTTGTTGGATTGGACAAAGCGTTTTCACATTATTAATGGCATTGCTCGTGGACTTGTCTACCTTCACCAAGATTCTAGATTGAGAGTTATTCATAGAGATTTGAAAACCAGCAATATCTTACTAGATACAAATTTAAACCCAAAAATATCAGATTTTGGCTTGGCTCGTACATTATGGGGAGATCAAATTGAGGCCAAAACAAACAGGATAGCTGGAACATACGGTTACATGTCTCCTGAATATGTCATGCACGGAGATTTCTCGATAAAATCAGATGTTTTTAGCTTTGGAGTAATATTATTAGAGATAATCAGTGGAAAGAAGAATAGAGGATTTTCAGATTTAGAAAACTACTTGAATCTTCTTGGATATGCATGGAGACTATGGAGAGAGGGAATGGCGTTGGAATTAATGGATCAAGCATTAGGAGAAAGATTCAATCCATCTGAAGTCATACAATGCATACAAGTGGGCCTGTTATGTGTACAACAAAGACCAGAAGATAGACCCGACATGTCATCTGTCGTTTTAATGCTGAACGGAGAGAAATCATTGCCCGACCCACATGTTCCAGCTTACTACATTGAAAGGAAAATACCTGAAGCTGATCCTTCCTCGGAAAAATGCAACCCCTCCTCACCAAATGAAATGTCCCTTTCAATATTCGAGGCAAGATAG 2478 0.3862 MKNFTVLPICVVLLFIRTSTSLDSITQSAPLRDGETLVSSGGVFEMGFFSPGKSNNRYLGIWYMHISPLTVVWVANREAPISDGSGILVTNDQGILALVDSTNRTVWSSSSSIIAEKPIVRLLDTGNLIISDQKYSKDHFIWQSFDYPCDTLLPGMKLGFNLVTGLNRFLSSWRSPDDPGQGENVLKLERRGYPQSFQFRRNVIHFRAGSWNGLYFTGYPVQKQNPVYKAKFVFNDKEAYYEYELVNSSVYSRIVMSPSGIGKRLVWSNQRGIWEIISANLADQCDNYGLCGAYSLCDFSSSRVCHCLKGFVPRNVEQWNISDWSGGCVRKALLDCNSLDSFRKYRGVKLPDTSSSRFNKTMSLEECRQSCLRNCSCTAYANLDIRDGGSGCLVWFKDLIDMKQLPQGGQDIFIRVPASELDFFEEKRYWNNNKRKLIGITVGSITINMSVILIVFGLIRCARKSKLKRSGKTKIYYSRNPCYNDLRMEDTEIQIFDLSVIVKATNNFSNINKLGEGGFGSVYKGTLGHGQELAVKRLSEYSIQGLEEFKNEVLLIAKLQHRNLVKLLGCCIEREEKLLIYEYMPNKSLDQFIFDEIRSKLLDWTKRFHIINGIARGLVYLHQDSRLRVIHRDLKTSNILLDTNLNPKISDFGLARTLWGDQIEAKTNRIAGTYGYMSPEYVMHGDFSIKSDVFSFGVILLEIISGKKNRGFSDLENYLNLLGYAWRLWREGMALELMDQALGERFNPSEVIQCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLPDPHVPAYYIERKIPEADPSSEKCNPSSPNEMSLSIFEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03009 825 ProSiteProfiles Protein kinase domain profile. 508 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03009 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 766 - -
Accr1g03009 825 SMART serkin_6 508 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g03009 825 Gene3D Hepatocyte Growth Factor 334 414 - -
Accr1g03009 825 Pfam S-locus glycoprotein domain 206 314 IPR000858 GO:0048544
Accr1g03009 825 ProSiteProfiles PAN/Apple domain profile. 336 417 IPR003609 -
Accr1g03009 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 335 416 - -
Accr1g03009 825 Gene3D - 17 145 IPR036426 -
Accr1g03009 825 Gene3D Transferase(Phosphotransferase) domain 1 584 787 - -
Accr1g03009 825 Pfam Protein tyrosine and serine/threonine kinase 511 777 IPR001245 GO:0004672|GO:0006468
Accr1g03009 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 583 - -
Accr1g03009 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Accr1g03009 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 179 IPR036426 -
Accr1g03009 825 SMART blect_4 28 148 IPR001480 -
Accr1g03009 825 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Accr1g03009 825 Pfam PAN-like domain 336 402 IPR003609 -
Accr1g03009 825 SUPERFAMILY Protein kinase-like (PK-like) 492 807 IPR011009 -
Accr1g03009 825 CDD PAN_AP_plant 334 417 - -
Accr1g03009 825 Gene3D Phosphorylase Kinase; domain 1 471 583 - -
Accr1g03009 825 CDD B_lectin 28 148 IPR001480 -
Accr1g03009 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 145 - -
Accr1g03009 825 SMART ntp_6 337 416 IPR003609 -
Accr1g03009 825 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Accr1g03009 825 MobiDBLite consensus disorder prediction 802 825 - -
Accr1g03009 825 CDD STKc_IRAK 514 781 - -
Accr1g03009 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Accr1g03009 825 Pfam D-mannose binding lectin 70 174 IPR001480 -
Accr1g03009 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03009 Accr-Chr1 66848624 66852583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03009 431 794 Receptor kinase-like Gene Family AT4G23190 50.943 1.04e-124 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g03009 PK_Tyr_Ser-Thr 3.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03009 - - pcin:129299332 1425.99