Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03004 ATGACGAAGCCTTCTTCTAGTGATCATCAAAAGAACGGATTGAAGAAAGGTCCGTGGACTCCTGAAGAGGATCAGAAGCTCATCGATTATATTCATAAACATGGACACGGCAAATGGCGAACTCTTCCCAAGAATGCTGGACTTAAGAGATGTGGAAAGAGTTGCCGGCTACGCTGGACAAATTACTTAAGGCCAGATATCAAGAGAGGCAGATTCTCTTTCGAGGAAGAAGAAACCATCATCCAGTTACATAGTGTTTTGGGAAACAAGTGGTCCACGATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACTCATATCAAGAAGAGGCTGTTGAAGATGGGGATTGATCCAGTGACTCACACTCCATGCTTGGATATTCAACAACTCTCCTCCATTCTCAACTCTTCTCTCTACAACTCACCTCATGTTAACCATCCTCCTCATCACTTTGGAATGGGAAATAATAATATATTAAATCCAAGCCTCTTAAGCTTGCTCACAGCTTTCTTATCATCTTCATCTCAAAACCCAGATGCTCCAAATCAAAATTACCACCACTTGAATAACTCTATCCAAACCTTCCCTCTTCAAGAAAACCAATCCTTTGCTGCTTCATTACAGACTTTACCTCTGGAATCACAACAGATGATCTCTCCAGATACCACTAATTTTAGCTTCGAAAGTAGCCTGCCAAATGTGGGGCCCTACGAAGGAGGCCAGATCAATTACTCTACCAGTCTTTTGGAGAATCATCAGATTGCACAAAACAACAGAAGCGATCCGAATTTCACTACTTTAGGGCCATTGATATCGTACTCGACGCCTTCATCTTCTACTAGTCCGAACAATTTGAATTCGTCCGCATCTTCCACAGCGTTCGTCAAGGGAGCAACTGAAGAGGAAAGGGACACATACTGCAGCAACATGTTGATGTATAACATCTCAAACGCCTTGAATAATATGGATGGCTCTAATTGTCTTTTGTGA 1011 0.4224 MTKPSSSDHQKNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNSSLYNSPHVNHPPHHFGMGNNNILNPSLLSLLTAFLSSSSQNPDAPNQNYHHLNNSIQTFPLQENQSFAASLQTLPLESQQMISPDTTNFSFESSLPNVGPYEGGQINYSTSLLENHQIAQNNRSDPNFTTLGPLISYSTPSSSTSPNNLNSSASSTAFVKGATEEERDTYCSNMLMYNISNALNNMDGSNCLL 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03004 336 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Accr1g03004 336 FunFam MYB-related transcription factor 15 68 - -
Accr1g03004 336 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Accr1g03004 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Accr1g03004 336 SMART sant 68 116 IPR001005 -
Accr1g03004 336 SMART sant 15 65 IPR001005 -
Accr1g03004 336 FunFam Transcription factor MYB39 71 132 - -
Accr1g03004 336 MobiDBLite consensus disorder prediction 1 21 - -
Accr1g03004 336 Gene3D - 71 118 - -
Accr1g03004 336 CDD SANT 71 114 IPR001005 -
Accr1g03004 336 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Accr1g03004 336 CDD SANT 18 63 IPR001005 -
Accr1g03004 336 Gene3D - 13 69 - -
Accr1g03004 336 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Accr1g03004 336 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 3 264 - -
Accr1g03004 336 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Accr1g03004 336 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03004 Accr-Chr1 66796391 66797785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03004 10 327 MYB Transcription Factor Family AT4G21440 47.159 8.60e-91 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g03004 Myb_DNA-binding 6.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03004 K09422 - gmx:547460 346.665