Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g03003 ATGATGACGAAGCCTTCTTCTAGTGATCATCAAAAGAACGGATTGAAGAAAGGTCCGTGGACTCCTGAAGAGGATCAGAAGCTCATCGATTATATTCATAAACATGGACACGGCAAATGGCGAACTCTTCCCAAGAATGCTGGACTTAAGAGATGTGGAAAGAGTTGCCGGCTACGCTGGACAAATTACTTAAGGCCAGATATCAAGAGAGGCAGATTCTCTTTCGAGGAAGAAGAAACCATCATCCAGTTACATAGTGTTTTGGGAAACAAGTGGTCCACGATTGCTGCTAGCTTGCCGGGAAGAACAGATAATGAGATCAAGAATTATTGGAACACTCATATCAAGAAGAGGCTGTTGAAGATGGGGATTGATCCAGTGACTCACACTCCATGCTTGGATATTCAACAACTCTCCTCCATTCTCAACTCTTCTCTCTACAACTCACCTCATGTTAACCATCCTCCTCATCACTTTGGAATGGGAAATAATAATATATTAAATCCAAGCCTCTTAAGCTTGCTCACAGCTTTCTTATCATCTTCATCTCAAAACCCAGATGCTCCAAATCAAAATTACCACCACTTGAATAACTCTATCCAAACCTTCCCTCTTCAAGAAAACCAATCCTTTGCTGCTTCATTACAGACTTTACCTCTGGAATCACAACAGATGATCTCTCCAGATACCACTAATTTTAGCTTCGAAAGTAGCCTGCCAAATGTGGGGCCCTACGAAGGAGGCCAGATCAATTACTCTACCAGTCTTTTGGAGAATCATCAGATTGCACAAAACAACAGAAGCGATCCGAATTTCACTACTTTAGGGCCATTGATATCGTACTCGACGCCTTCATCTTCTACTAGTCCGAACAATTTGAATTCGTCCGCATCTTCCACAGCGTTCGTCAAGGGAGCAACTGAAGAGGAAAGGGACACATACTGCAGCAACATGTTGATGTATAACATCTCAAACGCCTTGAATAATATGGATGGCTCTAATTGTCTTTTGTGA 1014 0.4221 MMTKPSSSDHQKNGLKKGPWTPEEDQKLIDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNSSLYNSPHVNHPPHHFGMGNNNILNPSLLSLLTAFLSSSSQNPDAPNQNYHHLNNSIQTFPLQENQSFAASLQTLPLESQQMISPDTTNFSFESSLPNVGPYEGGQINYSTSLLENHQIAQNNRSDPNFTTLGPLISYSTPSSSTSPNNLNSSASSTAFVKGATEEERDTYCSNMLMYNISNALNNMDGSNCLL 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g03003 337 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Accr1g03003 337 MobiDBLite consensus disorder prediction 1 22 - -
Accr1g03003 337 CDD SANT 72 115 IPR001005 -
Accr1g03003 337 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Accr1g03003 337 FunFam MYB-related transcription factor 16 69 - -
Accr1g03003 337 CDD SANT 19 64 IPR001005 -
Accr1g03003 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 69 119 IPR017930 -
Accr1g03003 337 Gene3D - 14 70 - -
Accr1g03003 337 SUPERFAMILY Homeodomain-like 14 111 IPR009057 -
Accr1g03003 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 4 265 - -
Accr1g03003 337 SMART sant 16 66 IPR001005 -
Accr1g03003 337 SMART sant 69 117 IPR001005 -
Accr1g03003 337 Gene3D - 72 119 - -
Accr1g03003 337 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Accr1g03003 337 Pfam Myb-like DNA-binding domain 70 114 IPR001005 -
Accr1g03003 337 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 68 IPR017930 -
Accr1g03003 337 FunFam Transcription factor MYB39 72 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g03003 Accr-Chr1 66796388 66797785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g03003 11 328 MYB Transcription Factor Family AT4G21440 47.159 7.40e-91 274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr1g03003 Myb_DNA-binding 6.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g03003 K09422 - gmx:547460 346.665