Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02997 ATGATGTTGTCGTCTTCGCCTTCAGCGATGGCGAGAAGCTCGCTAGAAGAAATGCTTGAATCAATACGGCTGAGAGGAGAAGAAGAGAAGCCGAAGGACTTGCCACCAGCTTTGCCAGCTCGTCCGACGTCGAGAGCTCGGCGTCCCTCAGCGAGACGATCGCTGCCTAATAAATTTAGGGTTGAAGGTGATGAGCATGCAATAACAAGCTCCAAGAATAATTCAAATGCAAAGGCAAAAGAGACCAAGAAGAAAGAAGGGGATGTGGGACATAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGATATGGAATCGCCTTATATCGTGACCTCGGAAGAGAGTATGAGCCAACCATCATCAGAGGACCCTGTTTCAGCATCTAGTGCTTCCATAGCAACATCAGGGAAGATTCAGGAGTTGGATGCTCATGACAATGTTGCCTATTACATAAAAGAGAAACTACGCGTTTGGTGTAGGCCACCAAATGGAAAGTGGGAGCTAGGACAGATACAATCAACTTCAGGAGAAGAAGCTTTTGTTTCGCTCTCACATGGAGATATTATGAAAGTGGCAAGATCAGAGCTTTTACCAGCTAATCCAGATATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTAAATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTCTCAGGACATGATATATAATAAAGCAGGACCTGTTTTAATTGCCCTCAACCCCTTCAAAGACATCCAGATATATGGAAATGATTGTATCTCGGCTTATAGGCAGAAGACTACGGATATTCCTCACGTTTATGCTATAGCAGATATGGCTTTTAATGAGATTATGAGAGATGAAGTAAACCAATCCATTATTATAAGTGGCGAGAGTGGATCTGGGAAGACAGAGACAGCAAAGTTTGCCATGCAATACTTAGCAGTTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGGAAGTTGATTGAGATTCATTTCAGCACGCTGGGGAGGATATGTGGGGCCAAAATTCAAACTTTTCTGTTAGAAAAGTCAAGAGTTGTTCAACTGGCCAGCGGCGAGAGGTCGTATCATATCTTTTATCAACTTTGTGCTGGTTCTTCTCCTGATCTTAAAGAGAGACTGAATCTTAAAGCTGCTAGCGAATATAAATATCTCAATCAAAGTGACTGCATGGCAATTGATGGTATTAATGATGCTAAAAATTTTCATAAGCTAATGAAAGCACTGGATGATGTTCGAATTTGCAAAGAGGATCAAGAGCAAGTTTTCAAGATGATTGCTGCAATACTGTGGCTGGGAAATATATCATTCCAAGTAACTGACAATGAAAATCACGTTGAGGTTGTAAACGATGAAGCTGTTACCAAAGCTGCCCTGCTAATGGGTTGCAGTTCCCAGGATTTGATGGTAACTTTATCTACTCGGAAAATCCAAGCTGGGAAAGATACTATTGCCAAAAAGTTGACATTGTGGCAGGCAACTGACACAAGGGATGGATTGGCAAAGTTCATATATGCAAGATTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGCGGGTAAACGCTGCACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAACAGGATGACTATGAATTGGATGGCGTGGATTGGACAAAAGTAGAATTTGAGGACAATCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCTAGGGCTACTGATCTAACATTCGCCAACAAACTTAGACAGCACCTGAGTGCTAATTCTTGTTTCAAAGGGGAAAGAGGCAGAGCTTTTCGTGTTTGTCATTATGCGGGGGAGGTTTCCTATGACACAACTGGATTCCTAGAAAAGAACAGAGATCTTCTGCCTCCAGATTCCATTAAACTCCTGTCATCATGTATTTGTCAGCTGCCGCAGTTGTTCTCTAACCAGTCAAATTCCTCCCACGTAGGCGTATTGGGTTCACAAAAGCAGAGTGTTGGGACAAAGTTCAAGGGTCAATTATTCAAGCTGATGAAGCAGTTGGAGGGCACCGCACCTCACTTTATTCGCTGCATAAAGCCCAATACCAAGCACATTGCTGGAATATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTCGAAGGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGCCAGCATATCACAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAAGTGTATCTCCGAACAGGGCAGCTTGGCGTCCTGGAGGATAGGAGGAAACATGTTATACGGGGAATACTTGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGACACTTTTACGCCCTCAAGAATGGAGCAATAGCTTTACAATCATTTGTTCGCGGAGAGATTTCAAGAAAGACATTTCATGAGATGAAGTCTGCTGCATCTATTGCTTCTGACAAGCTCCATCAGACCCAGGCAATTACGCGTTTACAATCTGTGATCCGTGGGTGGCTGGTTCGAAGACGTGCTAGTAGTATCATTCATAAGTTGAAGAAAGCTAAACATAAGCAAAAGTCACGTTCTAAGATGTCAGAAATGAAGGATTTGTCCAAAGAGCAGGTTCAGAATCTGCCATCAACTTTGTCAGAACTCCGGAACCGGGTTGTCAAAGCTGAAGCAACTCTGATGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTCGAGACAAGGTGGATTGAGTATGAGATGAAGATGAAATCGATGGAACAGATGTGGCAAAAACAGATGGCATCTTTGCAAAGTCTTTCAGTTGCTAGGAGGAGCCTTGCTGCTGAGAATTCCACTGATCAACCTGGAAGATACGATGCTGTGTCACCTTGCTTCTATGACTCTGAAGATGCCACTTCCATGGAATCCAGAACACCCACGGGCAGCACACCCATCAAATTTCCCGGCACTCCGTATGAGAATGGAACAATGAGAGAGGCTAACGATACTTTCAATGCAGTCAGCAATCTGATGAAAGAATTTGAGCGGCGGAAGCAGACTTTTGATGATGATGCTAGAGCTCTACTTGCGGTTAGATCAGGGCAGCCTGCTCACATGAGTCCAAACGAAGAACTCCGGCAGCTTAAACGCCGATTTGAAGGATGGAAGAAAGAATACAAGGGACGATTACGGGAAACAAAAGCAAAGCTTTCTAAGACGGGGAGTCCAGAAGCCGAAATTAGTTGTCAAAGGTGGTGGGGCAAGATAGGCTCAAGAGGACTATAG 3612 0.4297 MMLSSSPSAMARSSLEEMLESIRLRGEEEKPKDLPPALPARPTSRARRPSARRSLPNKFRVEGDEHAITSSKNNSNAKAKETKKKEGDVGHKRKGSFASKKMKQDMESPYIVTSEESMSQPSSEDPVSASSASIATSGKIQELDAHDNVAYYIKEKLRVWCRPPNGKWELGQIQSTSGEEAFVSLSHGDIMKVARSELLPANPDILEGVDDLIQLSYLNEPSVLHNLRFRYSQDMIYNKAGPVLIALNPFKDIQIYGNDCISAYRQKTTDIPHVYAIADMAFNEIMRDEVNQSIIISGESGSGKTETAKFAMQYLAVLSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGRICGAKIQTFLLEKSRVVQLASGERSYHIFYQLCAGSSPDLKERLNLKAASEYKYLNQSDCMAIDGINDAKNFHKLMKALDDVRICKEDQEQVFKMIAAILWLGNISFQVTDNENHVEVVNDEAVTKAALLMGCSSQDLMVTLSTRKIQAGKDTIAKKLTLWQATDTRDGLAKFIYARLFDWLVEQINKSLEAGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQDDYELDGVDWTKVEFEDNQECLDLFEKKPLGLISLLDEESNFPRATDLTFANKLRQHLSANSCFKGERGRAFRVCHYAGEVSYDTTGFLEKNRDLLPPDSIKLLSSCICQLPQLFSNQSNSSHVGVLGSQKQSVGTKFKGQLFKLMKQLEGTAPHFIRCIKPNTKHIAGIYDEDLVLQQLRCCGVLEVVRISRAGYPTRRMHQEFARRYGFLLSEASISQDPLSISVSVLQQFNIPPEMYQVGYTKVYLRTGQLGVLEDRRKHVIRGILGVQKWLRGHQARRHFYALKNGAIALQSFVRGEISRKTFHEMKSAASIASDKLHQTQAITRLQSVIRGWLVRRRASSIIHKLKKAKHKQKSRSKMSEMKDLSKEQVQNLPSTLSELRNRVVKAEATLMQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMASLQSLSVARRSLAAENSTDQPGRYDAVSPCFYDSEDATSMESRTPTGSTPIKFPGTPYENGTMREANDTFNAVSNLMKEFERRKQTFDDDARALLAVRSGQPAHMSPNEELRQLKRRFEGWKKEYKGRLRETKAKLSKTGSPEAEISCQRWWGKIGSRGL 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02997 1203 MobiDBLite consensus disorder prediction 1 133 - -
Accr1g02997 1203 ProSiteProfiles IQ motif profile. 874 901 IPR000048 GO:0005515
Accr1g02997 1203 SMART iq_5 894 916 IPR000048 GO:0005515
Accr1g02997 1203 SMART iq_5 871 893 IPR000048 GO:0005515
Accr1g02997 1203 SMART iq_5 930 952 IPR000048 GO:0005515
Accr1g02997 1203 MobiDBLite consensus disorder prediction 18 35 - -
Accr1g02997 1203 MobiDBLite consensus disorder prediction 1079 1098 - -
Accr1g02997 1203 ProSiteProfiles IQ motif profile. 931 960 IPR000048 GO:0005515
Accr1g02997 1203 PRINTS Myosin heavy chain signature 566 594 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 PRINTS Myosin heavy chain signature 619 647 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 PRINTS Myosin heavy chain signature 334 361 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 PRINTS Myosin heavy chain signature 291 316 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 PRINTS Myosin heavy chain signature 237 256 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 Pfam IQ calmodulin-binding motif 876 892 IPR000048 GO:0005515
Accr1g02997 1203 Pfam IQ calmodulin-binding motif 932 950 IPR000048 GO:0005515
Accr1g02997 1203 ProSiteProfiles IQ motif profile. 895 923 IPR000048 GO:0005515
Accr1g02997 1203 ProSiteProfiles Myosin motor domain profile. 207 870 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 FunFam Myosin IE heavy chain 447 555 - -
Accr1g02997 1203 FunFam Unconventional myosin-XIX 578 760 - -
Accr1g02997 1203 CDD MYSc_Myo8 221 858 IPR036022 -
Accr1g02997 1203 Gene3D - 876 923 - -
Accr1g02997 1203 MobiDBLite consensus disorder prediction 110 133 - -
Accr1g02997 1203 MobiDBLite consensus disorder prediction 964 983 - -
Accr1g02997 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 923 IPR027417 -
Accr1g02997 1203 MobiDBLite consensus disorder prediction 77 101 - -
Accr1g02997 1203 MobiDBLite consensus disorder prediction 1079 1103 - -
Accr1g02997 1203 Coils Coil 989 1023 - -
Accr1g02997 1203 Gene3D Kinesin motor domain 206 803 IPR036961 -
Accr1g02997 1203 Gene3D - 804 871 - -
Accr1g02997 1203 FunFam Myosin heavy chain 390 446 - -
Accr1g02997 1203 Pfam Myosin head (motor domain) 209 858 IPR001609 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 Coils Coil 1106 1126 - -
Accr1g02997 1203 Gene3D - 578 760 - -
Accr1g02997 1203 PANTHER MYOSIN 200 1190 - -
Accr1g02997 1203 Gene3D Myosin VI head, motor domain, U50 subdomain 447 555 - -
Accr1g02997 1203 Gene3D - 390 446 - -
Accr1g02997 1203 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 154 203 IPR004009 GO:0003774|GO:0005524|GO:0016459
Accr1g02997 1203 SMART MYSc_2a 201 871 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02997 Accr-Chr1 66723499 66731790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02997 1 1199 Myosins gene family AT5G54280 61.762 0.0 1540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02997 K10357 - gmx:100819335 1659.81