Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02979 ATGGAGAGCACCGACTCATCCACCGGTTCCCAGCAGCCCAACCTGCCACCGGGGTTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAGAAGGTGTCCTCGGTTCCCCTCCCCGTGGCCATCATCGCCGAGGTCGACCTCTACAAGTTCGACCCCTGGGAACTCCCCGCTAAGGCAGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGGGACAGGAAGTACCCGAACGGAGCGAGGCCAAACAGGGCGGCCACATCAGGGTATTGGAAGGCGACGGGGACGGATAAGCCCGTGCTCACATCCAATGGAAACCAAAAGGTGGGCGTCAAGAAAGCTTTGGTCTTTTACGGAGGCAAACCACCGAGAGGCATCAAAACCAATTGGATCATGCACGAGTATCGCATCCTCGATAATAAGCCCAACAATAAGCCTCCTGGTTGTGACTTAGCCAACAAGAAAAACTCTCTTCGGCTGGACGACTGGGTGCTGTGCCGAATTTACAAGAAGACCAACACGCAGAGATCACCTATGGATCATGAAAGGGACGATTCGATGGATGATATAATTGGCGTTGGAGGGGTTCCTGCTTCGATCAACGTGGGCCAAATGAATGCGACGAGGTTTCACCTTTCCAAGATGTCCACATTAAGCTATGGTGGAACCTCATTACTGGAGAATCATCACCATCATCATGACCAGAACTTGCTGGAAGGGGTTATATCAAGCACCAACAACAACAATAAGGAATCAGATCTTCAACTTCCCTTTGTGTCAACCATGACTGCTTCCACTGCCTCCAATTCTAACACCAAACGAACACTGTCGTCGCTGTATTGGGGCAATAATAACGAAGACGAGGACCTGAATGGCACCAAAAGGTTGAGTTTGGACGAGGATCATCATCATCATGCTAGTAACAATAACAATGAAGGTGGTGGTAATTCCATAGCTACCTTGCTTAACCAGATTCCTCAGACTCCTTCATTGCACCACCAGTCAATGCTTGGCTCATACCCATATTCAATACCTGGGATGAATTGGTATGCTTGA 1071 0.5051 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKVSSVPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKVGVKKALVFYGGKPPRGIKTNWIMHEYRILDNKPNNKPPGCDLANKKNSLRLDDWVLCRIYKKTNTQRSPMDHERDDSMDDIIGVGGVPASINVGQMNATRFHLSKMSTLSYGGTSLLENHHHHHDQNLLEGVISSTNNNNKESDLQLPFVSTMTASTASNSNTKRTLSSLYWGNNNEDEDLNGTKRLSLDEDHHHHASNNNNEGGGNSIATLLNQIPQTPSLHHQSMLGSYPYSIPGMNWYA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02979 356 MobiDBLite consensus disorder prediction 1 20 - -
Accr1g02979 356 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Accr1g02979 356 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
Accr1g02979 356 MobiDBLite consensus disorder prediction 1 17 - -
Accr1g02979 356 PANTHER NAC TRANSCRIPTION FACTOR 56 15 224 - -
Accr1g02979 356 FunFam NAC transcription factor 56 24 181 - -
Accr1g02979 356 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Accr1g02979 356 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02979 Accr-Chr1 66573710 66575192 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02979 1 356 NAC Transcription Factor Family AT3G15510 50.535 1.90e-119 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr1g02979 NAM 9.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02979 - - gmx:100170710 496.508