Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02977 ATGAAGAAGCAAAACAGGAACTTGGAGCAGGAGATGAACGACATGGAAGCTCAAACTAAGTTCAAAGCTCTTGCTAGCTTTCAAAAGCAGAACAATCTTCCTCTCACTCTTAAGTTTGAGGATGTGGTGTGCATGATCAAGACCAAGACCACAAAAGGTGGATTATTCAACAAGAACACAGAATATGAAGAGAAAGTGATACTAAAAGGAGTGTCAGGGATAGTGGAACCAGGCGAAATGCTTGCAATGCTAGGACCATCTGGAAGTGGCAAAACGACACTCTTGAATGCATTAGGAGGCAGACTCAGGAGCAACACGAAAGTCCAAGGAGCTATTACTTACAACAATGAACCCTTCTCAAACACAACCAAGAGAGACATGGGATTTGTCACCCAAGATGACATTCTCTACCCACACTTAACTGTCACTGAAACATTAGTCTTCACAGCCCTTCTCAGACTACCAAACACTCTCACAAAAAAAGAGAAAGTGTCATGTGCAGAAACTATGATAACCCAACTAGGGTTAACAAAGTGTAAGGATAGCATAATAGGAGGGCCATTGGTGAGAGGAGTTTCAGGAGGAGAGAGGAAGAGGGTGAGTATTGGGCAAGAGATGTTGGTGAACCCTAGATTGCTGTTTTTGGACGAGCCAACATCTGGACTTGACTCGACGATGGCTCAGAGTATTGTGTCCACTTTGTGGGAGCTGGCTAATGCTGGAAGGACCGTGGTTATGACCATTCACCAACCTTCAAGCAGATTGTACTACATGTTTTGTAAGGTTTTGTTGTTGTCTGAAGGAAGCCCTTTGTTCTTTGGGAAGGGTTCTGATGCCATGCACTATTTTCTGAGTATTGGATATGCCCCTACTTTAGGCATGAACCCTTCAGATTTCCTTTTGGATCTTGCAAATGGTATTTATACTGATGAATCTGGTGAAGATCATGACTCACTTAAGCAGACGTTGGTGTTAGCATACAGGCATAACCTTGAAGCACAAGTGAAGGAAATGGTTTGTGCAGCAAGTGATATTGGCAAAAGTGAAGGTAGATTTCAGGGAAGAGAGTTAGATGGATGGTCTACAACTTGGTTTCAGCAATTCAGTGTGCTGCTCAAAAGGGGAGTGAAGGAGAGAAGATATGAGTCATTCTCTGGCCTCAAAGTTACTCAAATCGTCATGGCTGCCACCATTTCAGGAGTTCTATGGTTTAAGTCTGACATTTCGCACTTGCAGGATCAAATCGGTCTCCTATTCTTCATAGGTAGTTTTTGGAGTTTCTTCCCATTTTTTCAAGCCATCTGCACATTCCCACAAGAAAGGACAATGCTTGAGAAAGAAAGATCCTCTGGAACATACAGGCTTTCCTCTTACTTCATCTCAAGGACTGTAGCTGACCTGCCCATGGAACTTGTTCTTCCCACAGTTTTTCTCATCATATGCTACTGGATGGTAGGCCTCAAACCCCATGTCCTGAACTTCTTATATACACTCTTCACCCTCTTACTCAGTGTCCTGGTCTCACAAGGCCTCGGCTTTGCCCTCGGTGCAATTGTCATGGATCAAAGCTCTGTAACTACACTTGGCTCTGTGGTTATGCTCACTTCCATACTGGCTGGTGGATACTATGTCCAACATGTCCCCAAATTTATTGCTTGGATCAAGTATTTGTCCATCAACTACTACACATACCAATTGTTTGTGGGGTCTCAGTATGAGAGTAAGGACACCTACCCTTGTTCTGAAGGGCAGTGTTTGGTTGCAGAATTTCCTTCCATAAAGCAAATTGGGCTGCATGTGAAGGACCAAGTGATTGCTGCTTTGGCACTGGTGATAATGCTGATAGGTTTTAGACTCATTGCTTACTTAGCTCTAACGAGGATTGGGTTGACTAAGAAACTTGTCTAG 1908 0.435 MKKQNRNLEQEMNDMEAQTKFKALASFQKQNNLPLTLKFEDVVCMIKTKTTKGGLFNKNTEYEEKVILKGVSGIVEPGEMLAMLGPSGSGKTTLLNALGGRLRSNTKVQGAITYNNEPFSNTTKRDMGFVTQDDILYPHLTVTETLVFTALLRLPNTLTKKEKVSCAETMITQLGLTKCKDSIIGGPLVRGVSGGERKRVSIGQEMLVNPRLLFLDEPTSGLDSTMAQSIVSTLWELANAGRTVVMTIHQPSSRLYYMFCKVLLLSEGSPLFFGKGSDAMHYFLSIGYAPTLGMNPSDFLLDLANGIYTDESGEDHDSLKQTLVLAYRHNLEAQVKEMVCAASDIGKSEGRFQGRELDGWSTTWFQQFSVLLKRGVKERRYESFSGLKVTQIVMAATISGVLWFKSDISHLQDQIGLLFFIGSFWSFFPFFQAICTFPQERTMLEKERSSGTYRLSSYFISRTVADLPMELVLPTVFLIICYWMVGLKPHVLNFLYTLFTLLLSVLVSQGLGFALGAIVMDQSSVTTLGSVVMLTSILAGGYYVQHVPKFIAWIKYLSINYYTYQLFVGSQYESKDTYPCSEGQCLVAEFPSIKQIGLHVKDQVIAALALVIMLIGFRLIAYLALTRIGLTKKLV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02977 635 Pfam ABC transporter 68 220 IPR003439 GO:0005524
Accr1g02977 635 FunFam ABC transporter G family member 22 55 286 - -
Accr1g02977 635 ProSitePatterns ABC transporters family signature. 192 206 IPR017871 GO:0005524|GO:0016887
Accr1g02977 635 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 283 IPR027417 -
Accr1g02977 635 SMART AAA_5 77 269 IPR003593 GO:0016887
Accr1g02977 635 Pfam ABC-2 type transporter 366 572 IPR013525 GO:0016020|GO:0140359
Accr1g02977 635 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 18 622 - -
Accr1g02977 635 Pfam ABC-2 type transporter 249 331 IPR043926 GO:0140359
Accr1g02977 635 Gene3D - 56 284 IPR027417 -
Accr1g02977 635 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 37 292 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02977 Accr-Chr1 66512045 66515287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02977 75 253 Calmodulin-binding Proteins AT2G36910 27.513 1.11e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02977 K05681 - gmx:100816135 820.846