Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02959 ATGAGGTCCCAAAGGCATCACCGGAGAAACTTTGTCCGGCCATCGTTTTCTCCGGACAATGCTGAACCCACCCACTTCATGAAGATCGTACTTCCGGGAGCCATTCATGCCGAAAACATGAGAATTCCAAAGGATTTCGTGAGAAGATTTGAGAATGAACTGTGTGCTAGTGAGGCTACGATTGGTGTTCCAGATGGTCGTGTGTGGAAGATGGAACTTAAGAAATCTGAAAACGAAGTTTATTTCTGCAAGGGTTGGGAGGAATTTGTGAAATACTACTCTCTTAGATCTGGCTTCTTTTTAGTGTTTAAATACGAAGGCAAGTCACAGTTCAGTGCGGTGATCTTTGATTCGAGTGCTGCTGAGATTTACTATCCGCCCAAACTTAACTCTGAGAAGCAGAACTCGGCACCTAAATGTCGTAGAAAAAGGCCACACAGCTTTGATCAATGTGACCACAACACAAGGAGCCAAAAGCAGAAGTTAGTGGAAGATGAAAAAGATATAATCGACATAGAAGATGACGATGCATTAAGCCATGGCAAATCAGGGAACAGGGATAGATCTGGGCAAGGCCATAGTTCCAAAATGAAGAAGATAACTTTGAGTAAAAAGCAAAGAGCCCAGAATCTGAAACAAGCAGCAAATTGA 651 0.4301 MRSQRHHRRNFVRPSFSPDNAEPTHFMKIVLPGAIHAENMRIPKDFVRRFENELCASEATIGVPDGRVWKMELKKSENEVYFCKGWEEFVKYYSLRSGFFLVFKYEGKSQFSAVIFDSSAAEIYYPPKLNSEKQNSAPKCRRKRPHSFDQCDHNTRSQKQKLVEDEKDIIDIEDDDALSHGKSGNRDRSGQGHSSKMKKITLSKKQRAQNLKQAAN 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02959 216 SMART B3_2 26 119 IPR003340 GO:0003677
Accr1g02959 216 MobiDBLite consensus disorder prediction 135 194 - -
Accr1g02959 216 PANTHER B3 DOMAIN-CONTAINING 22 187 - -
Accr1g02959 216 MobiDBLite consensus disorder prediction 132 216 - -
Accr1g02959 216 Gene3D - 18 120 IPR015300 -
Accr1g02959 216 Pfam B3 DNA binding domain 36 115 IPR003340 GO:0003677
Accr1g02959 216 CDD B3_DNA 25 117 IPR003340 GO:0003677
Accr1g02959 216 SUPERFAMILY DNA-binding pseudobarrel domain 21 119 IPR015300 -
Accr1g02959 216 ProSiteProfiles B3 DNA-binding domain profile. 25 119 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02959 Accr-Chr1 66374253 66375063 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02959 26 125 B3 DNA Binding Superfamily AT3G18990 44.000 1.09e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr1g02959 B3 3.4e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02959 - - pcin:129315065 256.144