Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02957 ATGGAAGCAGACGCGCCACCATTCCCTCGGACGACGTCCTGCATCGCCGCCATGGGAACTGCATTGCTCCTCCTAAGGCTTATGTGCTTCATTTTCACTCATTTCACCATCGCCGTATACGTCTTCACCTTCTACCTCACGGTCATATACTGGTTCAGAGGACATGACTTGGAGGATTTTGACCCAGAAGACGATGACGAGAAGGCAATGAAGTTTCTGAAAGCATTCTTAAGGGCAGTGAAGGGAAACGAAGAAAGAGGGAGAAAAGAGTGGAAGAAGGTAGGAGGCAGTATTGGGTGTTTTGGAAGCGAAGAAATGGTGGAATTGGGTTATAGAGAGTGTTCGATTTGCATGGATGGATTTGAGAAAGGAGGCAAGTGTCTGGTTTTTCCTGGTTGTGGACATATATTTCACTGCAAGTGTATCGCGCGCTGGTTGAAGATGAAGAAGCTGACGTGTCCATTTTGTCGTTCCAGCGTGGACGGGTTGAATGACAACGGAACCAGAGTTTCAGAGCTCATCGCTTTGACGAGCACCATGGCGCTCATCGCTGCACGTAAAGCTGCACAGCCCATTTACATTTTCAACGGTACACACAGATTCGTGAGTACGTCTTGGGCCCAAATCTTAACCAGTTAA 639 0.4804 MEADAPPFPRTTSCIAAMGTALLLLRLMCFIFTHFTIAVYVFTFYLTVIYWFRGHDLEDFDPEDDDEKAMKFLKAFLRAVKGNEERGRKEWKKVGGSIGCFGSEEMVELGYRECSICMDGFEKGGKCLVFPGCGHIFHCKCIARWLKMKKLTCPFCRSSVDGLNDNGTRVSELIALTSTMALIAARKAAQPIYIFNGTHRFVSTSWAQILTS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02957 212 CDD RING-H2_PA-TM-RING 113 157 - -
Accr1g02957 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 103 171 IPR013083 -
Accr1g02957 212 SMART ring_2 114 156 IPR001841 -
Accr1g02957 212 SUPERFAMILY RING/U-box 113 161 - -
Accr1g02957 212 ProSiteProfiles Zinc finger RING-type profile. 114 157 IPR001841 -
Accr1g02957 212 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 28 160 IPR044675 -
Accr1g02957 212 Pfam Ring finger domain 113 157 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02957 Accr-Chr1 66356066 66356704 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02957 113 160 C3H Transcription Factor Family AT2G18670 52.083 4.74e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02957 - K15692 lang:109363523 85.1149