Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02944 ATGGAGTCTCACACACCTCTCAGCTTCATACTCCTGGTCCTCAGCCTTCTCTCTCTTTCCCATGCTCGTACCTTCTACGCTGGTAACCGAGACGGTTGGGTCTTGAACCCCTCCGAGAGTTACGCTCAATGGTCTTCTCGTAACAGATTTCAGATCAATGACGTTATGGTGTTCAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAGCAAGGAGGATTACGACAAGTGTAATACCAAGAACCCCATCAAGAAGTTTGACGATGGTAATTCCCAGTTCACGTTTGATCGTTCTGGACCTTTCTACTTCATCAGTGGGCATGATGGTAATTGTGACAAGGGTCAGAAGTTGACTGTTGTTGTCTTGTCCGTCCGATCATCCTCACCGACACCTGGAAAGCCAACGCCTGCTACCCCTCCTTCTGGTGGAGTCACCCCTGTTTCACCTCCTGGCTCTCCGGTCACCACGCCCACCGTTCCCTCCCCTTCCGTTAACCCTCCACCGTCATCTCCATCACCGGGAGGTTCTCCCAAAGCTCCATCCACAACGCCCAATCCACCATCTCAGGCACCGGGAGCCTCTGCACCTGGACAATCCACTCCGGTGGGTAATGCTCCGTCCAAGACACCATCCTCGCCAACCATGGCGCCGGCCAATGCACCTGGACAATCATCTCCGGTCGGTAACTCTCCGTCCATGACGCCGAACCCACCATCGATGGCTCCGGGAGCGTCTCCAGTGGGTAATGCTCCATCCATGACACCGAACGCACCATCCATGGCTCCGGGAGGATCTCCGACAGCGGCGTCTCCAGTAGGCAGTCCTCTGATGGGTTCAGGATCACCGGCGATGTCTCCGGCTACTTCACCGGAATCATCGTCACCTATGGGATCCCCACCACAACCTACAGCAACAAGTCCATCAGGATCAGCATCTGGTGCGCCGGCTTCGGGCCCAGGAGGAAGTCCAGCACCCTCATCGTCAGCGACCAACGAGTCCACGCCGCCGCCGGCTTCATCAGCAGCATGGACTGAAACTGCTCCGAACTTGTTGGGGTATGCAATTACTATTATGGTCGGTGCTGCTCTCCTTACCATTTTTGGTGCTTAA 1113 0.5544 MESHTPLSFILLVLSLLSLSHARTFYAGNRDGWVLNPSESYAQWSSRNRFQINDVMVFKYQKGSDSVLEVSKEDYDKCNTKNPIKKFDDGNSQFTFDRSGPFYFISGHDGNCDKGQKLTVVVLSVRSSSPTPGKPTPATPPSGGVTPVSPPGSPVTTPTVPSPSVNPPPSSPSPGGSPKAPSTTPNPPSQAPGASAPGQSTPVGNAPSKTPSSPTMAPANAPGQSSPVGNSPSMTPNPPSMAPGASPVGNAPSMTPNAPSMAPGGSPTAASPVGSPLMGSGSPAMSPATSPESSSPMGSPPQPTATSPSGSASGAPASGPGGSPAPSSSATNESTPPPASSAAWTETAPNLLGYAITIMVGAALLTIFGA 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02944 370 MobiDBLite consensus disorder prediction 193 231 - -
Accr1g02944 370 MobiDBLite consensus disorder prediction 250 264 - -
Accr1g02944 370 MobiDBLite consensus disorder prediction 126 344 - -
Accr1g02944 370 Pfam Plastocyanin-like domain 33 116 IPR003245 GO:0009055
Accr1g02944 370 PANTHER BLUE COPPER PROTEIN 23 199 IPR039391 GO:0009055
Accr1g02944 370 PRINTS Proline rich extensin signature 142 163 - -
Accr1g02944 370 PRINTS Proline rich extensin signature 202 227 - -
Accr1g02944 370 PRINTS Proline rich extensin signature 130 142 - -
Accr1g02944 370 PRINTS Proline rich extensin signature 184 201 - -
Accr1g02944 370 PRINTS Proline rich extensin signature 165 181 - -
Accr1g02944 370 MobiDBLite consensus disorder prediction 133 192 - -
Accr1g02944 370 CDD OsENODL1_like 23 118 IPR041846 -
Accr1g02944 370 FunFam Early nodulin-like protein 1 22 127 - -
Accr1g02944 370 MobiDBLite consensus disorder prediction 304 344 - -
Accr1g02944 370 SUPERFAMILY Cupredoxins 21 123 IPR008972 -
Accr1g02944 370 Gene3D - 21 128 IPR008972 -
Accr1g02944 370 ProSiteProfiles Phytocyanin domain profile. 23 124 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02944 Accr-Chr1 66240557 66241882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02944 1 236 Phytocyanin Superfamily AT4G27520 44.000 2.25e-52 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02944 - - pcin:129315024 286.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02944 1 66240557 66241882 Accr1g02944 1 66240557 66241882 ECH