Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02937 ATGGAGAGGAAACGACCATTCACTGAGAAGTCAAAGGATAAAGTTATTGAAGAAGCAGAAGATGAAGAAGAGGAAGAAGATGAAAGGAAGGGAGGTTGTGGTGGTGGTCATGTTGCAGAAGAGGAAAAGAAGAAAGGGGTTGGTGGGAGTAACAGAAGAGGATCAAGTGGGGGTTATAAAGTTTCTTCAGCTTCCTGTCAAGCAGAGAGGTGTGGAGCTAACTTGGCTGATGCAAAGAGATACCATCGCCGCCATAAAGTGTGTGAGTTTCATTCCAAGGCGCTTGTTGTGATCGTTGCAGGGACGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCATGACATAGGGGAATTTGATGAGGCGAAGAGGAGCTGCCGGAGAAGATTGGCGGAGCACAACGAGAGGAGGCGGAAAAGCAATGCTGAGTCTCACAACGATGGTGGCGAAGATCATAACCATCAGAACTCAATGGAAGGGCGTTTCAGACATGTTGATGACAGGGGAAGAAGAGTGAATCAGATGGACGTTAATTCTGGGAATCGGAGCAGCAAGTCTTTCCATATCAGATAA 573 0.4729 MERKRPFTEKSKDKVIEEAEDEEEEEDERKGGCGGGHVAEEEKKKGVGGSNRRGSSGGYKVSSASCQAERCGANLADAKRYHRRHKVCEFHSKALVVIVAGTRQRFCQQCSRFHDIGEFDEAKRSCRRRLAEHNERRRKSNAESHNDGGEDHNHQNSMEGRFRHVDDRGRRVNQMDVNSGNRSSKSFHIR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02937 190 MobiDBLite consensus disorder prediction 1 17 - -
Accr1g02937 190 MobiDBLite consensus disorder prediction 174 190 - -
Accr1g02937 190 Pfam SBP domain 66 139 IPR004333 GO:0003677
Accr1g02937 190 MobiDBLite consensus disorder prediction 1 61 - -
Accr1g02937 190 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 46 149 IPR044817 GO:0003677
Accr1g02937 190 Coils Coil 123 143 - -
Accr1g02937 190 SUPERFAMILY SBT domain 65 144 IPR036893 GO:0003677|GO:0005634
Accr1g02937 190 ProSiteProfiles Zinc finger SBP-type profile. 63 140 IPR004333 GO:0003677
Accr1g02937 190 MobiDBLite consensus disorder prediction 29 49 - -
Accr1g02937 190 MobiDBLite consensus disorder prediction 130 173 - -
Accr1g02937 190 MobiDBLite consensus disorder prediction 130 190 - -
Accr1g02937 190 Gene3D - 57 127 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02937 Accr-Chr1 66195079 66195865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02937 60 148 SBP-box Gene Family AT3G15270 65.169 1.38e-37 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Accr1g02937 SBP 3.2e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02937 - - aprc:113864686 191.045
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02937 1 66195079 66195865 Accr5g01002 5 35689569 35690985 ECH
Accr1g02937 1 66195079 66195865 Accr1g02937 1 66195079 66195865 ECH