Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02933 ATGGCGGACGCAGCAGGGTTGGCCGAGGCAGCAGGATCAAGATTCACTTCACTAGAGCTAATTGGACAGGGATCATTTGGGGACGTTTATAAAGGCTTCGACAAGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATTGAAGATATTCAGAAGGAAATTTCTGTTCTGCAACAATGTCGGTCTTTATATATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGACCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTAGCATTCTACGGGACTTGTTGCATGCAATTGATTACTTACACAGTGAAAGAAAAATCCATAGAGATATTAAAGCTGCAAACATTTTGTTGACTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGAGTGTCTGCTCAGTTAACAAGGACTATATCAAGGAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCCGAGGTCATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCGATTGAGATGGCGAAGGGGGAGCCTCCGCTTGCTGATCTTCACCCTATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCACCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTTGTGTCTTTGTGTCTAAAGAAGGTTCCTGCTGAGAGGCCGAGTGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCAAGGAAAAGCCCCAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAGTCAAAACCTAGAAATGGCCCACAAGAGACAGGGGAGGGATCTGATACTATGAAGGTGGTAAGAGATATAAGAAGCGAAGAAGCTCAAAGGCCAAGTGGTCAGGGTAAAAGCGTGAAAAATACTGGATGGGACTTCAGCATTGGTGGGTCACAGGGTACTGGAACAGTTCGCAGTTCACGTCCACCTCATAGTCCCACAACTGCTGTTAATCAAAGAAAAACTTCAGAGAGTGGCCATCAAGCAGCATCTGCCTACAGAAGTAGACTTAATGAATCTTCAGAAACTACCTCTGGAAAAGATGTCAGGGCTCCTTATCATGATGAGCGCAAGGGCAATCACCTGGATGATTTGCAGGATGAATTATCGGGCTATGAATCAGGAACTGTTGTCATTAGATCTCCAAAAGGATCACAGCCATCATTGAGTCGGGAGCATAGCTCTATGTCTAGCAGCAGCTTTTTTTCTCTTGAAGATGCTTCTACCAGTGGAACTATTGTTTTCCGTGGTCAGCATGACGATTCTGATTTGCAGACAACAAGATCCCGACTGGGTCTTCAGGAGAGAACTTCAAATGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCGAAAGCTGCCATGCAAGTAGGACGGAAAGGGAATGCCCGAGACAGATTTGTGGTGGGAAAGGTCAATAATGATTCACAAGAAGGCAGGAGAGACCAAGCAGCAGGCAGCCCCGATTCTGCCAGATCATCTCGTGACTATGTGGATGCGCAAAAGGGAATTTCAAGATCTCACCATCTTAGGGATGATGAAGAAAGTGCCAAAATAATGTCATCCTCTGTACCATTATCAAACTTGCTTATTCCTTCGGTGAAAGAGGCTATTGCTAATGATCCAGAAGGCTCAATTGTAGAAGTCATCAATTCACTTGTCAGCATGGAGCGGGCAAATCCAAAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTGCAGGAGCTGGCAGGTGACTTATTCAGCAAGTCAGCTTCAGAAGAAACTCAAAACACAAGCGCGGCAACTGATGACTGGAGGAAACTGCAGAACAAGGATACCCACTCACAAAGCAATTTAAGCCCACTCGCAAAATTTCTTCTCTCCAGATGGCAAGGTCAAGTCTCAAGGGATCTAAATCCAACTTAA 2082 0.4414 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRSLYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIASILRDLLHAIDYLHSERKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQSKPRNGPQETGEGSDTMKVVRDIRSEEAQRPSGQGKSVKNTGWDFSIGGSQGTGTVRSSRPPHSPTTAVNQRKTSESGHQAASAYRSRLNESSETTSGKDVRAPYHDERKGNHLDDLQDELSGYESGTVVIRSPKGSQPSLSREHSSMSSSSFFSLEDASTSGTIVFRGQHDDSDLQTTRSRLGLQERTSNAFLEDSAANLAEAKAAMQVGRKGNARDRFVVGKVNNDSQEGRRDQAAGSPDSARSSRDYVDAQKGISRSHHLRDDEESAKIMSSSVPLSNLLIPSVKEAIANDPEGSIVEVINSLVSMERANPKSCDVLVKKLLQRLASSKESSLKELQELAGDLFSKSASEETQNTSAATDDWRKLQNKDTHSQSNLSPLAKFLLSRWQGQVSRDLNPT 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02933 693 MobiDBLite consensus disorder prediction 540 561 - -
Accr1g02933 693 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02933 693 MobiDBLite consensus disorder prediction 641 668 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 322 391 - -
Accr1g02933 693 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Accr1g02933 693 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02933 693 MobiDBLite consensus disorder prediction 392 409 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 423 441 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 641 656 - -
Accr1g02933 693 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 641 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 275 409 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 516 561 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 307 321 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 421 441 - -
Accr1g02933 693 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02933 693 Coils Coil 614 634 - -
Accr1g02933 693 Coils Coil 41 68 - -
Accr1g02933 693 SUPERFAMILY Protein kinase-like (PK-like) 12 354 IPR011009 -
Accr1g02933 693 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Accr1g02933 693 CDD STKc_MST3_like 13 287 - -
Accr1g02933 693 MobiDBLite consensus disorder prediction 275 297 - -
Accr1g02933 693 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02933 Accr-Chr1 66160219 66167648 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02933 1 690 MAP Kinase Kinase Kinase Kinase AT3G15220 63.920 0.0 819
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Accr1g02933 Pkinase 1.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02933 K08838 - gmx:100786501 996.497