Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02932 ATGGCGGACGCAGCAGGGTTGGCCGAGGCAGCAGGATCAAGATTCACTTCACTAGAGCTAATTGGACAGGGATCATTTGGGGACGTTTATAAAGGCTTCGACAAGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATTGAAGATATTCAGAAGGAAATTTCTGTTCTGCAACAATGTCGGTCTTTATATATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGCGGCTCTGTTGCTGACCTACTCCAATCAGGTCCTCCACTTGATGAAATGTCAATTGCTAGCATTCTACGGGACTTGTTGCATGCAATTGATTACTTACACAGTGAAAGAAAAATCCATAGAGATATTAAAGCTGCAAACATTTTGTTGACTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGAGTGTCTGCTCAGTTAACAAGGACTATATCAAGGAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCCGAGGTCATTCAAAATTCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCGATTGAGATGGCGAAGGGGGAGCCTCCGCTTGCTGATCTTCACCCTATGAGAGTGCTTTTTATCATACCTCGAGAGAATCCACCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTTGTGTCTTTGTGTCTAAAGAAGGTTCCTGCTGAGAGGCCGAGTGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCAAGGAAAAGCCCCAAGCTTTTGGAGAGAATAAGGGAGCGTCCAAAATACCAAATAAAGGAAGATCAGTCAAAACCTAGAAATGGCCCACAAGAGACAGGGGAGGGATCTGATACTATGAAGGTGGTAAGAGATATAAGAAGCGAAGAAGCTCAAAGGCCAAGTGGTCAGGGTAAAAGCGTGAAAAATACTGGATGGGACTTCAGCATTGGTGGGTCACAGGGTACTGGAACAGTTCGCAGTTCACGTCCACCTCATAGTCCCACAACTGCTGTTAATCAAAGAAAAACTTCAGAGAGTGGCCATCAAGCAGCATCTGCCTACAGAAGTAGACTTAATGAATCTTCAGAAACTACCTCTGGAAAAGATGTCAGGGCTCCTTATCATGATGAGCGCAAGGGCAATCACCTGGATGATGATGAATTATCGGGCTATGAATCAGGAACTGTTGTCATTAGATCTCCAAAAGGATCACAGCCATCATTGAGTCGGGAGCATAGCTCTATGTCTAGCAGCAGCTTTTTTTCTCTTGAAGATGCTTCTACCAGTGGAACTATTGTTTTCCGTGGTCAGCATGACGATTCTGATTTGCAGACAACAAGATCCCGACTGGGTCTTCAGGAGAGAACTTCAAATGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCGAAAGCTGCCATGCAAGTAGGACGGAAAGGGAATGCCCGAGACAGATTTGTGGTGGGAAAGGTCAATAATGATTCACAAGAAGGCAGGAGAGACCAAGCAGCAGGCAGCCCCGATTCTGCCAGATCATCTCGTGACTATGTGGATGCGCAAAAGGGAATTTCAAGATCTCACCATCTTAGGGATGATGAAGAAAGTGCCAAAATAATGTCATCCTCTGTACCATTATCAAACTTGCTTATTCCTTCGGTGAAAGAGGCTATTGCTAATGATCCAGAAGGCTCAATTGTAGAAGTCATCAATTCACTTGTCAGCATGGAGCGGGCAAATCCAAAATCCTGTGATGTTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTGCAGGAGCTGGCAGGTGACTTATTCAGCAAGTCAGCTTCAGAAGAAACTCAAAACACAAGCGCGGCAACTGATGACTGGAGGAAACTGCAGAACAAGGATACCCACTCACAAAGCAATTTAAGCCCACTCGCAAAATTTCTTCTCTCCAGATGGCAAGGTCAAGTCTCAAGGGATCTAAATCCAACTTAA 2076 0.4412 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRSLYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIASILRDLLHAIDYLHSERKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPSAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQSKPRNGPQETGEGSDTMKVVRDIRSEEAQRPSGQGKSVKNTGWDFSIGGSQGTGTVRSSRPPHSPTTAVNQRKTSESGHQAASAYRSRLNESSETTSGKDVRAPYHDERKGNHLDDDELSGYESGTVVIRSPKGSQPSLSREHSSMSSSSFFSLEDASTSGTIVFRGQHDDSDLQTTRSRLGLQERTSNAFLEDSAANLAEAKAAMQVGRKGNARDRFVVGKVNNDSQEGRRDQAAGSPDSARSSRDYVDAQKGISRSHHLRDDEESAKIMSSSVPLSNLLIPSVKEAIANDPEGSIVEVINSLVSMERANPKSCDVLVKKLLQRLASSKESSLKELQELAGDLFSKSASEETQNTSAATDDWRKLQNKDTHSQSNLSPLAKFLLSRWQGQVSRDLNPT 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02932 691 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02932 691 Coils Coil 612 632 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 322 391 - -
Accr1g02932 691 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Accr1g02932 691 MobiDBLite consensus disorder prediction 421 440 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 307 321 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 514 559 - -
Accr1g02932 691 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Accr1g02932 691 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02932 691 MobiDBLite consensus disorder prediction 538 559 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 639 666 - -
Accr1g02932 691 Coils Coil 41 68 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 392 412 - -
Accr1g02932 691 SUPERFAMILY Protein kinase-like (PK-like) 12 354 IPR011009 -
Accr1g02932 691 CDD STKc_MST3_like 13 287 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 275 297 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 275 440 - -
Accr1g02932 691 Gene3D Transferase(Phosphotransferase) domain 1 12 303 - -
Accr1g02932 691 MobiDBLite consensus disorder prediction 639 654 - -
Accr1g02932 691 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 639 - -
Accr1g02932 691 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02932 Accr-Chr1 66160219 66167648 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02932 1 688 MAP Kinase Kinase Kinase Kinase AT3G15220 64.154 0.0 822
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Accr1g02932 Pkinase 1.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02932 K08838 - gmx:100786501 1001.5