Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02930 ATGGCTCCCCGAGACCCACCCATCCCCGTCGCCGCACCCAACGGCCCCACCCTTGCCGCCAAGGAGATTCGCTATCGCGGCGTCAGGAAGAGGCCCTGGGGGCGTTATGCCGCTGAGATCCGTGACCCCGGCAAGAAAACTCGCGTTTGGCTTGGCACTTTCGACACCGCTGAGGAGGCGGCCCGTGCCTACGACATCGCCGCACGGGATTTCCGTGGACCCAAGGCCAAGACCAATTTCCCCACTCCTTCTGAGCTTGTAAATAACACCAACAACTCTACCCGCAGTCCTAGCCAGAGCAGCACCCTCGATTCTTCCTCCCCGCCTCCGCCGCCGCCGCCCTTGGACCTTAGCCTCACTCCGCTTTCTGCCGGCGTCGGTGTTATGGGGTTTCCAGTTATCCCCGTGGCCCGCCCTGTTGTGTTTTTCGATGCGTTTGCGAGGGCTGATAACATGAGAAGCGTTGCCCGCCGTGAGATGTGCAAGTTTGACCGTCCGCTGACCGATTTACGTCCCGTCGCCGGTAGTGCGCAGAGCGACTCCAACTCTTCCTTTGTCGTAAACTACGAGCGTGCTCCACAGCCTCGGAGACTTCTGGATCTTGACCTTAACCTTGCTCCTCCGGCGGAGGTTGCCTGA 639 0.6088 MAPRDPPIPVAAPNGPTLAAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDIAARDFRGPKAKTNFPTPSELVNNTNNSTRSPSQSSTLDSSSPPPPPPPLDLSLTPLSAGVGVMGFPVIPVARPVVFFDAFARADNMRSVARREMCKFDRPLTDLRPVAGSAQSDSNSSFVVNYERAPQPRRLLDLDLNLAPPAEVA 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02930 212 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 24 163 - -
Accr1g02930 212 Pfam AP2 domain 24 73 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 Gene3D AP2/ERF domain 23 82 IPR036955 GO:0003700|GO:0006355
Accr1g02930 212 PRINTS Ethylene responsive element binding protein signature 47 63 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 SMART rav1_2 24 87 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 MobiDBLite consensus disorder prediction 73 118 - -
Accr1g02930 212 FunFam Ethylene-responsive transcription factor 2 24 82 - -
Accr1g02930 212 SUPERFAMILY DNA-binding domain 24 82 IPR016177 GO:0003677
Accr1g02930 212 CDD AP2 24 81 IPR001471 GO:0003700|GO:0006355
Accr1g02930 212 MobiDBLite consensus disorder prediction 104 118 - -
Accr1g02930 212 MobiDBLite consensus disorder prediction 81 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02930 Accr-Chr1 66147300 66147938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02930 20 144 AP2-EREBP Transcription Factor Family AT3G15210 65.693 1.17e-49 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr1g02930 AP2 1.1e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02930 1 66147300 66147938 Accr5g01012 5 35811029 35811724 ECH
Accr1g02930 1 66147300 66147938 Accr1g02930 1 66147300 66147938 ECH