Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02925 ATGGAGAATTTCTTCTTGTCGTTCCAAAACCAGAAACACAATAAAAAGAGGCTGACTGAAGATCAAGTGGGCATCCTAGAGAAAAGCTTTGCCTGCAGTAAGAAGCTGGAGCCAGAGCAGAAGTTGCAGCTTTCAAAACAACTTGGTGTACCTCCGAGGCAAATTGCGATATGGTACCAGAACAAGCGAGCTCGCTGGAAGACACGGAGTCTTGAGGAGGACTATGGCGCCTTGCAGTTGAAGCTAGAGAATGAGCTGGCTGAGAAGAAGCAGCTTGAGAGAGATGTCGAAAGGCTCAAGGCTGAGCTAAAGGAGGCCAAGGAGATGTTGCTCTCCATGAAACGTGAAGGAGGAGAAGGTCATAGTCATACTTCTTTGGCTGAATTTTCATATGATTGTGCAGAGGTTATGCAGGTTGAACAGCTTTATACTTGTTTCATGGGTTCAGATAAGTTCGTCTGA 462 0.4589 MENFFLSFQNQKHNKKRLTEDQVGILEKSFACSKKLEPEQKLQLSKQLGVPPRQIAIWYQNKRARWKTRSLEEDYGALQLKLENELAEKKQLERDVERLKAELKEAKEMLLSMKREGGEGHSHTSLAEFSYDCAEVMQVEQLYTCFMGSDKFV 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02925 153 Pfam Homeodomain 14 67 IPR001356 GO:0003677
Accr1g02925 153 CDD homeodomain 12 67 IPR001356 GO:0003677
Accr1g02925 153 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 11 121 IPR045224 GO:0003700
Accr1g02925 153 ProSitePatterns 'Homeobox' domain signature. 44 67 IPR017970 GO:0000981|GO:0006355
Accr1g02925 153 SMART HOX_1 11 73 IPR001356 GO:0003677
Accr1g02925 153 Coils Coil 75 116 - -
Accr1g02925 153 Gene3D - 8 76 - -
Accr1g02925 153 ProSiteProfiles 'Homeobox' domain profile. 9 69 IPR001356 GO:0003677
Accr1g02925 153 SUPERFAMILY Homeodomain-like 11 77 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02925 Accr-Chr1 66111968 66112429 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02925 12 149 Homeobox Transcription Factor Family AT5G53980 46.763 6.16e-34 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Accr1g02925 Homeodomain 1.6e-16 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02925 1 66111968 66112429 Accr1g02925 1 66111968 66112429 ECH