Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02921 ATGCGATTATCGTCCGCTTCCGGTTTGTCATTGGACCAGAGGAGACTTGATCGATCGGGGTCGCGGCTTCGGAAGAAGCACAAGAGGCTAGACTCAATATGCGAAAAGGAATATAATCGGAACCATAGTGAATTGAATGAGGATGGTGATGGGGCTGGTACTCCGGGCGCTGATACTGAGCTACGCCGCAGCTCTAGGGTTCGGCGAGCCCCAGTTGTACTCGATGCCTCTCCTCCTCCCCTTAAGAAACGGCGGAAGTTAGCTAAGAATGTAATGCTGAGGAGTGTGAGCGATGTCAAGAACCCAGTACATGTGAATCAGAGTCCTGGTGGGGTAGAGCGTCCGGGTACATGGAGTTCAAGGTTGAGATCCCGGGGTAAAAATGTAGGTTTCACGGTGAAGGGGGAGAGGGAACCACCGAGTAGTAAAAGGAAGCTGTTTGGGGATATGGACGAAAGCAGGGGCAATGGAAAACCAGAGGTTGTAGAGATTAATAAGAAAGAGGAATTGGAAGGTGGGATGCCAAAGGTTGTTAAGTCAAAAAGACCAGGGAGGATCAAAGCAACAAAGCATGCGGAAGATCATGAACATAATGAGTCCCATGGGAACTCAGATGAGAGCAAGAGTCAAGAAGTGGAGCTTATTCTGAACCAAGATGGGGAGAATGCTTCAATTTCAGGATCTAAATTGCCTGATGAGGATGTAGTGGAAATAGTGGATGGGAATGCCTCTCCAAAGATAGTGACTAGCGAGAGAAACATATGTGATAATTTGCAGTCACAGGAGTTTAATGGTAATGCTGAATTGTCCCCAAGGGAACATGTAGATAAACCAGTTGATCAACTGGAGAGTGTGAATGAAGGTGAAAATGGAAGAGATGCTGTAGAAATTGTTGAGAATCTTACTGAGCAAGTAGAAAATGAAGGATCTATCAATAAGGAATCTGCAGTTGATGAAAAGACCTTGCAAGATGAAAATATTGTAAAAATAGACAAGCCCAAACAAGCTTCAAATGATATAACTGACCAACCACGAATTAAAGAAGGCAGAAGGTGTAGTTTGTGTGGTGGAGGGACTGATGGTAAACCTCCAAAAAGGTTGGTTCTAGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCTTCAGCATCAGAGGAGCCTAATTATGATCCTTGGGATGGTTTTGGTGATGAATCTGGCTGGCTTGGGCGTCTCTTAGGTCCTATTAACGATCGCCATGGTATTGCCAGGATATGGGTTCATCAGCACTGTGCTGTATGGAGTCCAGAGGTATACTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCTCTTTGCAGAGGAAGGGCATTGAAGTGCACTCGTTGTGGGAGGCGAGGGGCTACCATTGGTTGTCGGGTTGATCGGTGTCCAAAGACGTATCACTTGCCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCCTGCACAGATCATAAACATTTCTTCCAACCTCAGGGTAATCAATATATAGCACGGATAAAGAAATTGAAAGCTAGAAAGATGAAGTTGGAGATGAGAAAGCTTTCAAATGATGCTTGGAGAAAGGATATTGAAGCAGAAGAAAAATGGTTGGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGTGAGAACAAGAGGCTTCATCGTGATTTATTGAGAATAGCCCCTATATACATTGGTGGTGCTGACTCTGATGGTGAAAGATCATTTCAGGGTTGGGAATCTGTTGCTGGGCTTAAGGATGTCATCAGTTGCATGAAAGAAGTTGTTATTTTGCCTCTGCTCTATCCTGAGTTCTTTGATAATTTAGGTCTTACACCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGCAAAACTTTAGTGGTCAGAGCATTGATAGGTGCGTGTGCTCGTGGTGATAAACGGATTGCATATTTTGCTCGCAAAGGTGCAGATTGCTTGGGGAAATATGTGGGTGATGCTGAACGCCAACTGAGACTACTATTCCAGGTTGCTGAAAAATGTCAACCTTCGATAATATTCTTTGACGAGATAGATGGATTAGCCCCAAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTGTCAACACTGCTTGCTCTTATGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTTATAGGTGCAACAAATCGTCCTGATGCAGTTGACCCAGCGCTTAGGCGTCCTGGAAGATTTGATCGGGAGATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCTCTTCACACACAGAGGTGGCCGAAACCAATCACTGGGTCCTTACTTGAGTGGATTGCAAAAAACACTCCTGGATTTGCTGGTGCAGATCTCCAGGCTCTCTGTACCCAAGCTGCCATCAATGCTTTGAAGAGAAACTTTCCTTTGCAAGAAGTGCTGTCTGCTGCTTCAGAGGAAGATTCTGGTGGTAAGCGCCTTGCCCTTCCATCCTTTGCAGTGGAGGAAAGGGACTGGTTGGAGGCTTTATCGTGTGCACCGCCGCCATGCTCCCGGAGAGAAGCTGGGACAGCTGCAAATGACATAGAGTGCGCCCCTCTTCCCACCCACCTTATACCTTGCTTGTTGCAACCATTATGCACTCTGCTTGTTTCTCTGCATCTTGATGGACGCTCATGGTTGCCGCCTCCTATTTTTAAATCTGTAACAAGGATTAAAAGTGCTATGATTTCTGCTCTGGACAAAAAGAAAATGTCTATTGATCAGTGGTGGTTGCATGTTGATGATTTTCTCCAGGACACAGATTTTGCTGTCAATTTAGGGAGGAAACTCACCTGTACTGGCATTTTATCTGCAAATGATGGTCAAGCTAGTTCTTGTGATCTTGTAGATGATACTGATGGCGATGTGAAACTTGAACCTCCTATTAAGCACCATGTGCGTACAGGTAGTGGTTTATTGTCAAATATGTCATTCATGGTGTTGAAGAAATCAGGATTTCGTATATTGATTTCTGGAAATCCCAAATCTGGTCAGAGGCATCTTGCTTCCTGCCTTCTTTACTGCTTTGTTGGTAATGTTGAAATTCAGAAGATTGATATGGCAACTATTTCTCAAGAAGGACAAGGAGATGTGGTACAAGGGATTTCACAAATATTAATGAAATGTGCTGGTGTGCAATCATGTGTAGTCTTCATGCCAAGAATTGATCTATGGGCTGTGGAGACTCATTTTCAGGTTGCTGAAAATTCTGATCACTTCTCCACTAATGATCAAGTTTCTGAGATGGAAGAGTCCTGTTTAACACTGAGTGAGGTTGTTGAAAATAAAAGTGAATTCAATTCAAAGAAAAGGAAATCTGTAGATATGGCCAAAGGTCAAGTCATCGGAAGGGCTTCACATGCATGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTGTCTACATCCTTGATGATTCTGGCTACATCAGACGTCCCATATTCAGAACTTCCATGTAAAGTAAGCGAGTTCTTTAGGAGTTACCAATCAAGCTGCAGCCAGTCTGCTTCCTTGGTGCAGACAATGCCTCGTTTTTCTGTGCAGATTAAGCGGAGCTTTAATCATGATGTTATGATCAATCTATCCACAGTGCAGCTAATGAGAAATGTAATTGAGCAGCTGGTTCAATTGGTCCACAAAAAATCTCATATGCATATTGGAGCCCGGAAAAGGCACATAACCTATGATTCAGTTCAAGGTTGTAAGGATAGGGCATGTCTGGGAAAAGATAATGGATCAGTCAATGGTGATGAGGTTAAAGTCCAACTTCCTGAACCCTCTACTAAAGTTCCATCACCACTTAGTAAACTGTGTTGGGTCACATCAAAACTCAAAGAAGGTCCTGCTGCTGATGTAAGTGGACCTTGGAAGGGTTGGCCTTTCAACTCCTGCATAATTCGCCCTAGTACCCTGCAAGACAAGGTGGCTAATTCTTGCAGCTCTAGCAATATTAAAAACAAAGAAAAATCTGGTATTGTCAGAGGCCTGGTGGCTGTTGGTTTATCAGCATACAGAGGAGATTATACATCTGTCAGGGAAGTTTCTAGTGAGATACGCAAGGTTCTTGAAATGTTAGTTGGGAAAATCAACACAAAAGTTCAGGCTGGTAAAGATAGATATCAATTTCTTCGTATTCTATCGCAAGTGGCTTATTTGGAAGATATGGTCAATAACTGGGCCTATGCATTGTTGAGTCTTGAGCAGGACTCCCCGGACCTGGCTGCAAAACTTACATGGACTAGTGTCAGGTCATTGAACGGACATGAAAACCAACAAGTTGAAGATGAGGGTTGCCAGTTGGTTGCCCCCTTGGAAAGTCATGAGCCAGAGAAGCTGGAGGGAAGTCCCAATGCAAATGCTGCCAAGACACCCGAATCTCTTGTGTTGAATAACAGAAATGATGATGTGGATAAAGTTGATCATGATGGCAAAGTTTCAGAAGGATGTCCACAAAATACTTTTTCAGATGATCATATTAACAGCTCTGCTGCCATGAGCCAGCCCGTTGATCCAGTTATAATTGTGGAGAATGGAACACTATCTAAAGTATCTGAATCAGGACCAACTGGAACTCCTGAAATGATAAATGGAGAAATTGGGCCCTTAAAAGGCCCAAATGTATCTACTCTAACTCACACTGTCTCTCTTTCTGGAAATGAAGAGTTCAGATTGTCAAAAGGCTTAAATGGATCAACAGCTACCCATTCTGTTGCCTTTTCTGGTAATGCCTGCCAACTAGAGGGTGTTGAGATTGAAGACTCCAGGATAGCCTCTATTACTGTTCCCAGCTTGTCGTCAGCAGAGACTGATATTAAGTTAAGCGGTGGTGACTCTGACGTAGATGCCAACGCTGTAGAACTTACTGAATCTCCGAGTAAAAGCAGTGATCCTGCTGAATCTGGGGTTGTCTGTTTTTATCGATGTTGCCCTGGATGCCTTGACAGTCTTTATCATTTGACACGCAAAATCATTGTTCATAAGTGTAGCTTGAATGGAAGCGATTGGGCTGTCGAAGATGTCCATGATGTTCTTGCATCACTATCTGTGGATCTTATTTCAGCTGTTAAAAAACTTTATCCTGCTGAAGATTTCAATGACTTATATGATAAAACCTCTCACGCGCAGTCTGAAGGGACTCTTGATTGTTCAAACTCGAGAATGTGTAGCCCCAGAAATCTAGACAGGGTTTTTTGGCCAGCCGAATGTGTGTCTCACTCCACAAGCCAACATACAGCTGGAGGCAAAGATACAGCATTGAATGAACTGAAGCTTGATTTAAAATGTGTTTTCAGAGATGGTGTACTGGTTCAAATGGACCCTGATAAAGAAGCCTCTCTTCACTGTAAATTTGAGACCTTGTGCCTTTGTTCTTTTAGAGAGTTGATAGTAATGATGAAGCACCGTTTTGGCTGA 5490 0.4342 MRLSSASGLSLDQRRLDRSGSRLRKKHKRLDSICEKEYNRNHSELNEDGDGAGTPGADTELRRSSRVRRAPVVLDASPPPLKKRRKLAKNVMLRSVSDVKNPVHVNQSPGGVERPGTWSSRLRSRGKNVGFTVKGEREPPSSKRKLFGDMDESRGNGKPEVVEINKKEELEGGMPKVVKSKRPGRIKATKHAEDHEHNESHGNSDESKSQEVELILNQDGENASISGSKLPDEDVVEIVDGNASPKIVTSERNICDNLQSQEFNGNAELSPREHVDKPVDQLESVNEGENGRDAVEIVENLTEQVENEGSINKESAVDEKTLQDENIVKIDKPKQASNDITDQPRIKEGRRCSLCGGGTDGKPPKRLVLDNGESENEAYSGSSASEEPNYDPWDGFGDESGWLGRLLGPINDRHGIARIWVHQHCAVWSPEVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACTDHKHFFQPQGNQYIARIKKLKARKMKLEMRKLSNDAWRKDIEAEEKWLENCGEDEEFLKRENKRLHRDLLRIAPIYIGGADSDGERSFQGWESVAGLKDVISCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALMDGLKSRGSVVVIGATNRPDAVDPALRRPGRFDREIYFPLPSIEDRASILSLHTQRWPKPITGSLLEWIAKNTPGFAGADLQALCTQAAINALKRNFPLQEVLSAASEEDSGGKRLALPSFAVEERDWLEALSCAPPPCSRREAGTAANDIECAPLPTHLIPCLLQPLCTLLVSLHLDGRSWLPPPIFKSVTRIKSAMISALDKKKMSIDQWWLHVDDFLQDTDFAVNLGRKLTCTGILSANDGQASSCDLVDDTDGDVKLEPPIKHHVRTGSGLLSNMSFMVLKKSGFRILISGNPKSGQRHLASCLLYCFVGNVEIQKIDMATISQEGQGDVVQGISQILMKCAGVQSCVVFMPRIDLWAVETHFQVAENSDHFSTNDQVSEMEESCLTLSEVVENKSEFNSKKRKSVDMAKGQVIGRASHAWMSFIEQVESIGVSTSLMILATSDVPYSELPCKVSEFFRSYQSSCSQSASLVQTMPRFSVQIKRSFNHDVMINLSTVQLMRNVIEQLVQLVHKKSHMHIGARKRHITYDSVQGCKDRACLGKDNGSVNGDEVKVQLPEPSTKVPSPLSKLCWVTSKLKEGPAADVSGPWKGWPFNSCIIRPSTLQDKVANSCSSSNIKNKEKSGIVRGLVAVGLSAYRGDYTSVREVSSEIRKVLEMLVGKINTKVQAGKDRYQFLRILSQVAYLEDMVNNWAYALLSLEQDSPDLAAKLTWTSVRSLNGHENQQVEDEGCQLVAPLESHEPEKLEGSPNANAAKTPESLVLNNRNDDVDKVDHDGKVSEGCPQNTFSDDHINSSAAMSQPVDPVIIVENGTLSKVSESGPTGTPEMINGEIGPLKGPNVSTLTHTVSLSGNEEFRLSKGLNGSTATHSVAFSGNACQLEGVEIEDSRIASITVPSLSSAETDIKLSGGDSDVDANAVELTESPSKSSDPAESGVVCFYRCCPGCLDSLYHLTRKIIVHKCSLNGSDWAVEDVHDVLASLSVDLISAVKKLYPAEDFNDLYDKTSHAQSEGTLDCSNSRMCSPRNLDRVFWPAECVSHSTSQHTAGGKDTALNELKLDLKCVFRDGVLVQMDPDKEASLHCKFETLCLCSFRELIVMMKHRFG 1829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02921 1829 ProSitePatterns AAA-protein family signature. 732 750 IPR003960 GO:0005524|GO:0016887
Accr1g02921 1829 ProSiteProfiles Extended PHD (ePHD) domain profile. 391 501 IPR034732 -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 1466 1493 - -
Accr1g02921 1829 FunFam P-loop containing nucleoside triphosphate hydrolases superfamily protein 347 503 - -
Accr1g02921 1829 Gene3D - 589 863 IPR027417 -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 101 211 - -
Accr1g02921 1829 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 763 855 - -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 137 178 - -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 351 391 - -
Accr1g02921 1829 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 398 503 IPR013083 -
Accr1g02921 1829 PANTHER AAA DOMAIN-CONTAINING 25 1731 IPR045199 -
Accr1g02921 1829 SMART AAA_5 623 764 IPR003593 GO:0016887
Accr1g02921 1829 Pfam AAA+ lid domain 788 820 IPR041569 -
Accr1g02921 1829 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 589 854 IPR027417 -
Accr1g02921 1829 FunFam ATPase family, AAA domain-containing 2 586 769 - -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 1 80 - -
Accr1g02921 1829 Gene3D - 763 855 - -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 28 47 - -
Accr1g02921 1829 MobiDBLite consensus disorder prediction 187 208 - -
Accr1g02921 1829 Pfam ATPase family associated with various cellular activities (AAA) 627 762 IPR003959 GO:0005524|GO:0016887
Accr1g02921 1829 Pfam PHD-like zinc-binding domain 422 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02921 Accr-Chr1 66073296 66081009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02921 589 824 Calmodulin-binding Proteins AT3G56690 40.756 6.44e-45 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02921 - - ccaj:109789156 2182.14