Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02897 ATGATTAGCGCTGGATTATGTAGTCTCCGAATGTGTTGCTTGCATCTCCCTTGCTTCTCAGAGAAATATCTACTACGACCAGCTCGTCTCTCTTTCACTAGCCGCCGCCGCCTTTTGGCCACCGTATCATCGGTTTCCGGCGCTAATAAGAAGAAAACTAAAGAGAAGGTCATCGTCATTTCTGGCCCCACTGGGTCTGGTAAAAGCCAGCTTGCTTTAGAGCTCGCGAAGCGCCTCAATGGTGAAATTATCAGTGCGGATTCTGTCCAGGTGTACCAGGGTCTTGATGTTGGATCAGCAAAGCCCTCCAAAAATGATAGAAAGGAGGTACCACATCATCTGGTTGACATATTGCACCCATCTGAAGATTATTCTGTTGGGCAATTTTTTGAGGATGCAAGGCAAGCTACAAGGTGTATTCTTGACAATGGTCATGTTCCTATTGTTGTTGGGGGAACTGGGTTGTACTTAAGATGGTTCATTTATGGAAAGCCTGATGTCCCCAAGGCCTCTCCAAAGACTAAATCTGAAGTGTATTTGGAGTTAGCTGAATTACAGAGGAATAAGCAATGGGATGCAGCTGTGCAGTTGGTTGTAGAAGCAGGTGACCCAAAGGCCCAATTTATAACTCCCAATGATTGGTATCGATTGCAACGTAGCCTCGAGATTATTAAGTCTAGTGGATCACCTCCGTCTGCTTTTCGGGTACCATATGATTCTTTCATGGAACAGGGAGATTCTAGTGTTACGGACAACACTGACTGTTCTGATGTCAACGCTATTTCTGGTGGAATGAAAGAAAAATCCTCAGATTTGGACTATGAGTTCATTTGTTTTTTCCTTTCCACTCGAAGGCTTGACCTCTATAGATCAATTGATTATCGCTGTGAGGATATGCTATTAGAGAGGGATGGGATATTGTCCGAGGCTCAATGGCTTCTTAATATTGGTCTTCATCCTAATTCAAATTCTGCAACAAAAGCAATTGGGTACAGGCAGGCCATGGACTTCTTGGTAAGATGCAGACTGCAAGGAGGTCAGAGTTCAGTTCGAGAATTCTTCAATTTTTTACATGAATTTCAAAAGGCATCTAGGAACTTTGCCAAAAGGCAATTGACTTGGTTTCGAAATGAACATATATACCACTGGCTTGATGCTTCTAAACCTCTGGACGCCATTCTAGACTTTATTCATAGATCTTACCATGATAACAGTGGAACTCTCATTGTTCCTGAACACTTGCGAATGTCTAGAGATGCTTCTAACGGTCGAGAAGCCAATGATCTAAAGGCTTACCGCAGCAAAAATAGGCTTTTCTTGAATAAAGAGGATTGCGTTCATGTTCTGGACTGGATACGGAGAACTCAACAAGTCTTTTCAGTTTGA 1386 0.43 MISAGLCSLRMCCLHLPCFSEKYLLRPARLSFTSRRRLLATVSSVSGANKKKTKEKVIVISGPTGSGKSQLALELAKRLNGEIISADSVQVYQGLDVGSAKPSKNDRKEVPHHLVDILHPSEDYSVGQFFEDARQATRCILDNGHVPIVVGGTGLYLRWFIYGKPDVPKASPKTKSEVYLELAELQRNKQWDAAVQLVVEAGDPKAQFITPNDWYRLQRSLEIIKSSGSPPSAFRVPYDSFMEQGDSSVTDNTDCSDVNAISGGMKEKSSDLDYEFICFFLSTRRLDLYRSIDYRCEDMLLERDGILSEAQWLLNIGLHPNSNSATKAIGYRQAMDFLVRCRLQGGQSSVREFFNFLHEFQKASRNFAKRQLTWFRNEHIYHWLDASKPLDAILDFIHRSYHDNSGTLIVPEHLRMSRDASNGREANDLKAYRSKNRLFLNKEDCVHVLDWIRRTQQVFSV 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02897 461 Gene3D - 54 446 IPR027417 -
Accr1g02897 461 Hamap tRNA dimethylallyltransferase [miaA]. 57 395 IPR018022 GO:0008033
Accr1g02897 461 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 57 234 IPR018022 GO:0008033
Accr1g02897 461 Gene3D - 166 236 - -
Accr1g02897 461 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 54 386 IPR039657 -
Accr1g02897 461 FunFam tRNA dimethylallyltransferase 9 165 236 - -
Accr1g02897 461 Pfam IPP transferase 90 378 - -
Accr1g02897 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 184 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02897 Accr-Chr1 65932434 65937048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02897 60 338 C2H2 Transcription Factor Family AT2G27760 28.223 1.65e-20 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02897 K00791 - qsa:O6P43_029165 701.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02897 1 65932434 65937048 Accr1g02897 1 65932434 65937048 ECH