Gene search
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Accr1g02890 | 1473 | SMART | PHD_3 | 960 | 1001 | IPR001965 | - | |
| Accr1g02890 | 1473 | SMART | PHD_3 | 1002 | 1056 | IPR001965 | - | |
| Accr1g02890 | 1473 | CDD | PHD1_AIRE | 961 | 1000 | - | - | |
| Accr1g02890 | 1473 | Pfam | Tify domain binding domain | 882 | 932 | IPR032308 | - | |
| Accr1g02890 | 1473 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 1109 | 1233 | IPR016181 | - | |
| Accr1g02890 | 1473 | Gene3D | - | 1130 | 1245 | - | - | |
| Accr1g02890 | 1473 | SUPERFAMILY | FYVE/PHD zinc finger | 949 | 1001 | IPR011011 | - | |
| Accr1g02890 | 1473 | PANTHER | PHD FINGER FAMILY PROTEIN | 2 | 1399 | - | - | |
| Accr1g02890 | 1473 | Pfam | PHD-finger | 961 | 1002 | IPR019787 | - | |
| Accr1g02890 | 1473 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 945 | 1019 | IPR013083 | - | |
| Accr1g02890 | 1473 | ProSiteProfiles | Zinc finger PHD-type profile. | 958 | 1003 | IPR019787 | - | |
| Accr1g02890 | 1473 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 1108 | 1250 | IPR000182 | GO:0016747 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Accr1g02890 | Accr-Chr1 | 65883782 | 65891751 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Accr1g02890 | 1 | 416 | PHD Transcription Factor Family | AT3G14980 | 34.129 | 6.05e-47 | 182 |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | PHD | Accr1g02890 | TDBD | 3.7e-15 | No_clan |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Accr1g02890 | - | - | pcin:129315189 | 2419.42 |