Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02878 ATGAGCAGTTTCAGCTTCGCCGGTTTCTACGAGTCGTGGTTCGACCACCTCCAGCACCTTCTTCACCAGCTGTCCGCCGCCACACGCCCACCCAAGACCGCGGAGGAAAACCACAAGCTCCTCATCCTCATCGACAAGGTGATGGCCCACTACGACGACTACTACCGCACCAAGTCCGTCGCCGCGCAGAACGACCCCCTCCAAATGCTCGTCTCCCCCTGGGCCACCACCCTCGAACGCTCCCTCCATTGGATAGCCGGCTGGCGCCCAACCATCGCCTTCCACCTCGTCTACACCGAGTCCTCTGTTCTCTTCGAATCCCATATCATCGACATCCTCCGTGGAGTTCGTACCGGCGACCTCGGTGATCTCTCCCCATCTCAGTTCCGGCGAGTCAGCCAGTTGCAATGCGACACCGTGAAGGAAGAGAATGCGATAACGGAGGAGCTATCGGAGTGGCAGGATAGTGGGAGTGAGATGATAGAAGGGGTGGCGGAGATGGAGGAGAAGATGGAAGTTCTGGGGAAGATCATAACGAAAGCGGACGATCTCCGGCTGAGAACCCTTAAGAGCGTGGTGGGCCTCCTTACTCCACAGCAGGCCGTGGACTTCTTGATCGCCTCCGCCGAGTTGCTCTCCGGCATCCGCTCTTGGGGAATCAATCACGACCGTCGACGATCCAGATAA 687 0.5852 MSSFSFAGFYESWFDHLQHLLHQLSAATRPPKTAEENHKLLILIDKVMAHYDDYYRTKSVAAQNDPLQMLVSPWATTLERSLHWIAGWRPTIAFHLVYTESSVLFESHIIDILRGVRTGDLGDLSPSQFRRVSQLQCDTVKEENAITEELSEWQDSGSEMIEGVAEMEEKMEVLGKIITKADDLRLRTLKSVVGLLTPQQAVDFLIASAELLSGIRSWGINHDRRRSR 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02878 228 Pfam Seed dormancy control 21 99 IPR025422 GO:0006351|GO:0043565
Accr1g02878 228 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 5 227 - -
Accr1g02878 228 ProSiteProfiles DOG1 domain profile. 3 225 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02878 Accr-Chr1 65761457 65762459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02878 3 217 bZIP Transcription Factor Family AT5G06950 26.977 2.20e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02878 - - pcin:129315304 416.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr1g02878 1 65761457 65762459 Accr1g02878 1 65761457 65762459 ECH