Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02863 ATGAGACCCTTTTTGCTTACGCTATGCTTCTCTACCTTCTTGTGTGTAGTTTCTGCTCTGAGCCCTGATGGGGTCTCTCTGCTTTCTCTCTCAAAGCATTGGACATTTGTGCCCTCTTCCATAACCTCAAGCTGGAACATGTCAGACTCAACTCCATGCTCATGGGCAGGAATCCAGTGTGACAATGCCCACAACGTCATCTCCATTAATCTCACTTCTTTTTCCATTGTTGGCCAGTTAGGACCTGAAATAGCACAGTTAAGTCACTTGCAAACTCTTATTTTTTATTCTAACAGTCTCTCAGGAACAATTCCCCCTCAGATAGGCAATTGTAGTATGCTTGTTTATTTGGACCTTTCTGACAACTACCTCACAGGGGAAATACCAAATGTCTTAAGCAACTGTACTATGCTTGAGCACTTGGACCTTTCTGTGAATGCTCTTAGTGGGAAAATTCCAAACAGTTTCAAAAGCTTGCAAAATTTGCAATACTTCAACCTTTTCTCCAATCTAATAATTTCAAGCACTGGAATTCCTGAATACTTGTTTGATTTTCCTCAGTTAGACACTGTGTATTTGGAATTAAACAACCTAAGTGGTCCTATCCCTATAAATATTGGCAATAGCACCAAACTTAGGAGGTTGTATTTGGACAATAATCTCTTATCTGGGGTGATACCCTCTTCCATTGGAAACTGCAGCAAATTAGAGGAAGTGAGTCTGGGTAAGAACAGATTGCGGGGGATTTTACCTCAAAGTCTTAATAATCTCCATAATCTTGTTTATTTTGATGTCAGCTTTAATAATCTTGAAGGTCCAATTCCCTTAGGTTCTGGCAGTTGTGAAAGTCTATATTTTTTGGATCTGTCATACAATGTATTTAGTGGGGGTATTCCTACTGGATTAAGGAATTGTACTGGCCTGACACAAGTTTTTGCTGTCAATAGCAACTTAATAGGCAACATTCCATCTTTCTTTAGCCTCCCATGCAAACTCTCTGTTCTTCGCCTTCCTCGGAACCATTTGTCTGGACAGATACCTCCAGAAATAGGTCGTTGCAGGTCATTGAAGGAGTTGATTTTACATACCAATCAACTTGAGGGAGAAATTCCTGGTGAGTTGGGGATGCTATCTGAGTTGCAGACTTTGCATTTGTTTTACAATAAGCTCACTGGTGACATCCCAATTAGCATATGGAAAGTTCCAAGTCTTGTGAATGTTTTTTTGTTCAACAATAGCTTCCATGGGGAGCTACCTTTAGAAGTCACCAAACTTAAGCAGCTACAAAAAATCTCACTGGCTGATAACAATTTCTCTGGGGCTATACCTCAAAGCTTAGGAATTAATAGTAGTTTGGTGTGGTTGGACTTGACAAATAACAGTTTTACTGGTCCCCTCCCTCCGAATCTTTGTTTTGGTAAGAAATTAGAGAGGCTAGTTGTGGGTATTAATCAATTGCAAGGTAGCATACCTTCTGACCTAGGAGCTTGTACAACTCTCACAAGGTTGATTCTTAAATCAAACAACTTCTTTGGACCTCTTCCTAATTTTGAAAATAATATGAATCTTGAATACATGGACATCAGCGGCAATAATATCAGTGGAGCAATTCCATCAAGTTTAGGGAATTGCAAAAACCTCACTGATATTAATTTGTCCATGAACAAACTTTCAGGGTTCATTCCTTCAAAGCTAGGGAAACTGGCAAATCTTCGGAAGTTGAATCTTTCTGACAACAATCTGCAAGGTCCTTTGCCTCCTCTCTTGTCAAATTGTATCCTAATGGAATACTTTGATGTAGGATTCAATTCCCTAAATGGTTCATTTCCTTCAAGTTTGAGCAAATGGACAGGGCTATCAACTTTGATCTTAAGAGAGAATCATTTCACTGGAGGCATCCCAGCATTCTTAACAGAATTTGAAATGCTTTTTGAGCTACAACTTGGGGGAAATGAATTTGGGGGTGAAATTCCTAGCTTAATTGGATCGTTGCAGAATCTGCTATATGGGTTGAATTTAAGCGCTAATGAGTTGGTAGGCGATGTTCCATTAGAGATCGGGAAACTGAACAAGCTTCTGAGACTAGATTTGTCTCTTAACAATCTGTCTGGAAGCATAGAATTTCTTGAACAACTCTCTTCATTAGTTGAAGTAAATATCTCATTCAATTCATTTACTGGTCCTGTACCAAATGAGCTAATGAAGCTGATGAGTTCTCATCCATCATCATTCTTGGGCAATCCAGGTTTGTGTCTTAATTATTTGCCCTCAGATAGCTCAAACTGCCCCAAGGATGTCAGTTTAAAGACTTGTGCCTCCATGTCAAGTCATCATAAAGGACTGAGTAAAATTAAAATCATAGTGATATCACTTGGATCCTCTATTTTTGTTATTTTTCTGTTGTTAGGACTAGCTTTTATGCTTCTCCTTTGCAAAAGATCTAGGAAGGATCTCAGAATATTTGCGAATCACGGTTCATCTTCCTTTCTCAAGACAGTCATGGAGGCAACAGAGAATCTAAATGATCAGTATATAATTGGCAGAGGAGCTCATGGAGTGGTCTACAAGGTTTCAATGGATCCAAAAAATGTGTTTGCTGTGAAGAAAATTCCATTTGCCAACAATGAAGGGCAAAGCAAGAGCATGAGGAGAGAACTTGACACTGTTGGGAAGATCCGGCATCGAAATCTGGTGAGATTGAAGAACTTCTGGGTTGGAAAGGATTATGGCTTGATCATGTACACCTTCATGCAAAATGGAAGCTTGCATGATGTTTTGCATGAAATGAATCCACCAACATGCTTGGCTTGGAGTGTTCGCTATAAGATAGCTCTTGGAATTGCTCATGGACTAGCATACCTCCATTTTGATTGTGATCCAGTCATAGTACACAGAGACATCAAACCACAAAACATACTTTTAGATTCTGACATGGAGCCTCATATTGCTGATTTTGGCATTGCCAAGGTTTTGGATCAAATCACTGCTTCAACAACAACATCTATAGCTGTTCCTGGCACAGTGGGATATATTGCACCAGAGAATGCATTTTCAAGTGTAGTGAGCTGGAAATCTGATGTGTATAGTTATGGAGTGGTTTTGCTTGAGCTGTTAACCAGAAAGAAGGTGCTAGATGGTTCATTCATGGAGGGAACAGATATAGTGGGGTGGGTTAAATCTGCATGGGAAGAATCAAGAGAAATTGATGGGATTGTTGATCCAAGCCTTGGTGATGAACTTTGGTATTCAAATGTAAGGGAAGAAGTTGAACAAGTGTTTTTGGTGGCATTGAGATGTACTGAAAAGGATCCAAGTATAAGACCAACAATGAGAGAAGTCATCAGCCAATTGATTATTAGAAAAAAATCTTTTGTTGATAAGAAGTAA 3387 0.393 MRPFLLTLCFSTFLCVVSALSPDGVSLLSLSKHWTFVPSSITSSWNMSDSTPCSWAGIQCDNAHNVISINLTSFSIVGQLGPEIAQLSHLQTLIFYSNSLSGTIPPQIGNCSMLVYLDLSDNYLTGEIPNVLSNCTMLEHLDLSVNALSGKIPNSFKSLQNLQYFNLFSNLIISSTGIPEYLFDFPQLDTVYLELNNLSGPIPINIGNSTKLRRLYLDNNLLSGVIPSSIGNCSKLEEVSLGKNRLRGILPQSLNNLHNLVYFDVSFNNLEGPIPLGSGSCESLYFLDLSYNVFSGGIPTGLRNCTGLTQVFAVNSNLIGNIPSFFSLPCKLSVLRLPRNHLSGQIPPEIGRCRSLKELILHTNQLEGEIPGELGMLSELQTLHLFYNKLTGDIPISIWKVPSLVNVFLFNNSFHGELPLEVTKLKQLQKISLADNNFSGAIPQSLGINSSLVWLDLTNNSFTGPLPPNLCFGKKLERLVVGINQLQGSIPSDLGACTTLTRLILKSNNFFGPLPNFENNMNLEYMDISGNNISGAIPSSLGNCKNLTDINLSMNKLSGFIPSKLGKLANLRKLNLSDNNLQGPLPPLLSNCILMEYFDVGFNSLNGSFPSSLSKWTGLSTLILRENHFTGGIPAFLTEFEMLFELQLGGNEFGGEIPSLIGSLQNLLYGLNLSANELVGDVPLEIGKLNKLLRLDLSLNNLSGSIEFLEQLSSLVEVNISFNSFTGPVPNELMKLMSSHPSSFLGNPGLCLNYLPSDSSNCPKDVSLKTCASMSSHHKGLSKIKIIVISLGSSIFVIFLLLGLAFMLLLCKRSRKDLRIFANHGSSSFLKTVMEATENLNDQYIIGRGAHGVVYKVSMDPKNVFAVKKIPFANNEGQSKSMRRELDTVGKIRHRNLVRLKNFWVGKDYGLIMYTFMQNGSLHDVLHEMNPPTCLAWSVRYKIALGIAHGLAYLHFDCDPVIVHRDIKPQNILLDSDMEPHIADFGIAKVLDQITASTTTSIAVPGTVGYIAPENAFSSVVSWKSDVYSYGVVLLELLTRKKVLDGSFMEGTDIVGWVKSAWEESREIDGIVDPSLGDELWYSNVREEVEQVFLVALRCTEKDPSIRPTMREVISQLIIRKKSFVDKK 1128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02863 1128 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 808 916 - -
Accr1g02863 1128 ProSitePatterns Protein kinases ATP-binding region signature. 846 869 IPR017441 GO:0005524
Accr1g02863 1128 ProSiteProfiles Leucine-rich repeat profile. 570 592 IPR001611 GO:0005515
Accr1g02863 1128 FunFam Leucine-rich repeat receptor protein kinase EMS1 346 445 - -
Accr1g02863 1128 Gene3D Transferase(Phosphotransferase) domain 1 917 1126 - -
Accr1g02863 1128 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 203 298 - -
Accr1g02863 1128 Pfam Protein kinase domain 844 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02863 1128 ProSiteProfiles Protein kinase domain profile. 840 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02863 1128 Gene3D Ribonuclease Inhibitor 22 175 IPR032675 -
Accr1g02863 1128 Gene3D Ribonuclease Inhibitor 278 372 IPR032675 -
Accr1g02863 1128 Gene3D Ribonuclease Inhibitor 176 277 IPR032675 -
Accr1g02863 1128 SMART serkin_6 840 1125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02863 1128 Gene3D Ribonuclease Inhibitor 451 762 IPR032675 -
Accr1g02863 1128 SUPERFAMILY RNI-like 214 557 - -
Accr1g02863 1128 Pfam Leucine rich repeat 522 581 IPR001611 GO:0005515
Accr1g02863 1128 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Accr1g02863 1128 Pfam Leucine rich repeat 114 172 IPR001611 GO:0005515
Accr1g02863 1128 Pfam Leucine rich repeat N-terminal domain 22 61 IPR013210 -
Accr1g02863 1128 SMART LRR_typ_2 257 281 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 234 256 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 87 111 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 568 592 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 210 233 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 377 401 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 425 449 IPR003591 -
Accr1g02863 1128 SMART LRR_typ_2 159 185 IPR003591 -
Accr1g02863 1128 SUPERFAMILY Protein kinase-like (PK-like) 827 1119 IPR011009 -
Accr1g02863 1128 FunFam Leucine-rich repeat receptor-like protein kinase 22 176 - -
Accr1g02863 1128 ProSiteProfiles Leucine-rich repeat profile. 691 713 IPR001611 GO:0005515
Accr1g02863 1128 SUPERFAMILY L domain-like 468 763 - -
Accr1g02863 1128 SUPERFAMILY L domain-like 21 323 - -
Accr1g02863 1128 PANTHER RECEPTOR-LIKE PROTEIN 55 523 1117 - -
Accr1g02863 1128 Gene3D Phosphorylase Kinase; domain 1 807 916 - -
Accr1g02863 1128 Gene3D Ribonuclease Inhibitor 373 450 IPR032675 -
Accr1g02863 1128 FunFam Leucine-rich repeat receptor-like protein kinase PEPR1 474 760 - -
Accr1g02863 1128 FunFam Serine/threonine-protein kinase-like protein CCR4 917 1128 - -
Accr1g02863 1128 ProSitePatterns Serine/Threonine protein kinases active-site signature. 962 974 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02863 Accr-Chr1 65617768 65621264 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02863 11 1117 Receptor kinase-like Gene Family AT1G73080 49.598 0.0 1004
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr1g02863 Pkinase 2.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02863 - - pcin:129315433 1652.11