Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02859 ATGGAGTTTGCCACGTCAAGCTCCAATTTTGTCTCTGTTTTCTTCTCTGGATTTCTGCTTCTCTGTTTCTTCACTGTTTCTCCTTCAAACGCTCAACTTATACCCCAGGATGAAGTGAAGGCACTACAGGCAATATCAGATAAACTCACAAATGTGAATTGGAAGGTGACACAAACATCTTGTAGGACAGGGCTTGGATTTAATAACTTCACTCAATCTACTGGAATCACCAGGAATGTAACTTGCGATTGCACTTTCCAAAATGGCACCGTTTGCCATGTCACCCATATTCAGTTGAAAGGCCAGAATATAGCCGGACAAATACTCAGTGAATTTGGAAATCTTACCCAACTGACTGAGCTTGATCTCACTCGCAACTATCTCAATGGCACAATCCCAACAACAGTTTTTACCCGCATCCCTCTTGTCACTCTGTCACTTTTGGGGAATCGCATCAGTGGTCCAATTCCCGCAGAATTGGGTGAAATTGCTACTCTGCAGGAGCTGGTCTTGGAAGATAATCAGCTTGAAGGACGTCTTCCTCCGAGTCTTGGAAATTTGAGCAACCTACGGAGACTACTTCTTTCTGCAAATAATTTTACCGGGACAATACCAGAAACGTTTGGAAATCTAAAGAACCTAACTGATTTTAGGATAGATGGAAGCAGTTTATCAGGGAAGATACCTAATTTTATTGGGAACTGGACCAAAATTACTATCCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTTCCAACATATCGTTGCTGACAAATTTGGAAGAATTGAGAATATCGGACTTGAGTGGAACAACCAACATGACATTTCCTAATCTAAAGGATTTGAAGATTTTGGAAATACTGATATTGAGAAATTGTCGAATTGTTGGTCCCATTCCTGATGACTTTGGACAAATGACAAGTTTAAAGACTCTAGACTTGAGTTTTAACATGTTGAATGGTTCAATCCCTCCTTCATTGGACTTGAAATCATTTAATCACATGTTTCTGACAAACAATTCTTTGAGTGGAGAAATTCCAGAGTGGATGATAGCAAGCAAACAAAATATTGATTTATCTTACAACAATTTTAGTGGGACTTCTGCAACTAGTTGCCAAGAAATCAATGTGAACCTGGCTTCTAGTCTCTCATCCTCTGCAAGTAATTCACTCTCCTGTTTGAAGAAGGGTCTACGTTGTGAGGGAAACCCAAAACAGCATTCGTTGTTCTTAAACTGTGGAGGAGACGAGATTGAGTTTGAAGGTCATGTATATGAACCAGATTTAACTCGAAATGGCATTTCATACTCTACTTTTAACCTTCATGACAACTGGGCTTATAGCAGCACAGGACTATATATGGGTAATGATAGTGCTGATTTTGTCGCAACAAATTCATCTCCATTGAATGCCAGTATCCCAGAATACTACCAAACCGCTCGCCTTAGCCCTCTATCCCTTAAGTACTATGGCCTATGCATGATGAGGGGCAATTATAATGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACATATAGTAGCCTTGGTGTGCGCATATTTGATGTTTCAATTCAAGGTATCAAATACTTGGAAGATTTTAACATTGCAGAGAAAGCAGGTGGAGTTGGTAAGGGCATTACTATGGAATATGATGTTGATGTGAATGATGGAACCTTGGAGATCCATTTGTACTGGGCAGGGAAAGGAACTAATGCAATTCCCACTAGAGGTGTATATGGACCCCTAATATCTGCTATTACTGTGACCCCAAACTTCAAAATTCCTTCAAAAGGGTTGTCCACTGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTTTTCCTCGCATTGGTACTCATTATCCTCCGAAAGAAGGGTTTCCTTGGTGGGCAAGATCCAAAGGACAGAGAACTTTTAGATCTTAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACAGCCACCAATAACTTTGACCCAGCCAATAAGATCGGAGAAGGAGGATTTGGGCCTGTGTACAAGGGTGTGCTGTCAGATGGTGTAGTCATTGCTGTTAAGCAGCTCTCTTCCAAGTCAAAACAAGGGAATCGAGAATTTGTTAATGAGATAGGAATGATTTCTGCATTGCAGCATCCGAATCTTGTGAAGCTTTATGGCTGTTGCATAGATGGAAATCAACTGATGCTTATATATGAATACATGGAGAACAATTGTCTTGCTCGAGCACTTTTTGGCCGTGAAGAACAGATGATACACTTGGATTGGCCCACAAGATTGAAGATTTGTCAGGGGATAGCAAGGGGGTTAGCTCATCTTCATGAGGAGTCAAGATTGAAAATAGTACATAGAGACATTAAGGCAACAAACATCTTACTTGATAAGGATCTAAATGCTAAAATTTCTGACTTCGGTTTAGCAAAGCTTGATGAAGAAGAGAATACACATATCAGCACCCGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGAGAGGTTATTTGACAGACAAAGCAGATGTTTATAGCTTTGGAGTCGTCATTTTGGAGATTGTTAGCGGAAAGAACAACATGAATTATCGGCCAAAGGATGAGTTTGTTCATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAGGGAAACCTTTTAGAACTAGTGGATCCGCGTCTTGGTTCAAGATACTCTCAAGAAGAGGCCATGAGAATGCTCAACTTGGCTCTTTTGTGCACCAACCCATCTCCCTCCCTCAGACCAGCCATGTCATCTATAGTGAGCATGCTTGAGGGAAAAATGCCAATTCAAGCTCCAATAATCAAGCGCAAGGATTCAAGCCTGGATCAGCAGGATGCAAGGTTCAAAGCCTTGGAGATGCTATCACATGACAGCCAGACGTCTTTGGCCTCTCAAGTGAGTATTGAGCAAAGAGGCAATTCAATGGATGGACCATGGATTGATTCCTCAATATCTCTTCCTAGTGGAGATGATTATTCTTCATCTAGAAGACTTCTTTGA 3036 0.4091 MEFATSSSNFVSVFFSGFLLLCFFTVSPSNAQLIPQDEVKALQAISDKLTNVNWKVTQTSCRTGLGFNNFTQSTGITRNVTCDCTFQNGTVCHVTHIQLKGQNIAGQILSEFGNLTQLTELDLTRNYLNGTIPTTVFTRIPLVTLSLLGNRISGPIPAELGEIATLQELVLEDNQLEGRLPPSLGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDFRIDGSSLSGKIPNFIGNWTKITILNMQGTGMEGPIPSNISLLTNLEELRISDLSGTTNMTFPNLKDLKILEILILRNCRIVGPIPDDFGQMTSLKTLDLSFNMLNGSIPPSLDLKSFNHMFLTNNSLSGEIPEWMIASKQNIDLSYNNFSGTSATSCQEINVNLASSLSSSASNSLSCLKKGLRCEGNPKQHSLFLNCGGDEIEFEGHVYEPDLTRNGISYSTFNLHDNWAYSSTGLYMGNDSADFVATNSSPLNASIPEYYQTARLSPLSLKYYGLCMMRGNYNVKLHFAEIMFSDDQTYSSLGVRIFDVSIQGIKYLEDFNIAEKAGGVGKGITMEYDVDVNDGTLEIHLYWAGKGTNAIPTRGVYGPLISAITVTPNFKIPSKGLSTGAIVGIVVGSCVFLALVLIILRKKGFLGGQDPKDRELLDLKTGYFSLRQIKTATNNFDPANKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNCLARALFGREEQMIHLDWPTRLKICQGIARGLAHLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVILEIVSGKNNMNYRPKDEFVHLLDWAYVLQEQGNLLELVDPRLGSRYSQEEAMRMLNLALLCTNPSPSLRPAMSSIVSMLEGKMPIQAPIIKRKDSSLDQQDARFKALEMLSHDSQTSLASQVSIEQRGNSMDGPWIDSSISLPSGDDYSSSRRLL 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02859 1011 Gene3D Phosphorylase Kinase; domain 1 636 739 - -
Accr1g02859 1011 Gene3D Transferase(Phosphotransferase) domain 1 740 949 - -
Accr1g02859 1011 SMART LRR_typ_2 115 139 IPR003591 -
Accr1g02859 1011 SMART LRR_typ_2 308 332 IPR003591 -
Accr1g02859 1011 SMART LRR_typ_2 187 210 IPR003591 -
Accr1g02859 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Accr1g02859 1011 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Accr1g02859 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 369 - -
Accr1g02859 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 408 597 - -
Accr1g02859 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 970 - -
Accr1g02859 1011 SUPERFAMILY Protein kinase-like (PK-like) 649 944 IPR011009 -
Accr1g02859 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 636 739 - -
Accr1g02859 1011 Pfam Malectin domain 411 592 IPR021720 -
Accr1g02859 1011 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02859 1011 ProSiteProfiles Leucine-rich repeat profile. 310 332 IPR001611 GO:0005515
Accr1g02859 1011 MobiDBLite consensus disorder prediction 991 1011 - -
Accr1g02859 1011 Gene3D Ribonuclease Inhibitor 203 272 IPR032675 -
Accr1g02859 1011 Gene3D - 407 597 - -
Accr1g02859 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Accr1g02859 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Accr1g02859 1011 SMART serkin_6 664 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02859 1011 Gene3D Ribonuclease Inhibitor 37 202 IPR032675 -
Accr1g02859 1011 Gene3D Ribonuclease Inhibitor 273 386 IPR032675 -
Accr1g02859 1011 Pfam Protein tyrosine and serine/threonine kinase 668 935 IPR001245 GO:0004672|GO:0006468
Accr1g02859 1011 CDD STKc_IRAK 670 937 - -
Accr1g02859 1011 SUPERFAMILY L domain-like 84 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02859 Accr-Chr1 65584636 65593624 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02859 14 1002 Receptor kinase-like Gene Family AT1G53440 62.537 0.0 1240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02859 PK_Tyr_Ser-Thr 5.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02859 - - gmx:100815226 1389.02