Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02858 ATGGGCAATAACTCAGGAATGCCCATGTGTCTAAGAAGCAATAGCTGTCTTGAGAAATCGCGCTCTCTATATATAAATTGTGGTGGAGATTCGGTAATCTACAATGAAGGTATAAAATATGAAGGTGATGCAGATAAAGCTGGACCGGCTAGATTCTACTACGGTGGTGGAAAATGGGCATTTAGCACCACTGGCTATTACATGGATAATGATACTGAATACTATACCTGTTCAAACCAGTCTAGGCTTTCTATGACCGACGACGATGCTAAACTGTATATGAATGCCCGTGTTACTCCTATTTCTCTGACTTATTATGGGTTTTGCCTTGAAAATGGAAGATACAGACTGAAACTTCATTTTGCTGAGATCATGTTCACTGATGATCAAACATATAGCAGCCTTGGAAGGCGTTTATTTGACATCTACATTCAGGGAGAGAAGGTGCTAGAAAACTTCAACATTGCTGAACGAGCAGGAGGAGTAGGGAAGGCGATAATAGAACCATTCACTACTGATGTCTCTAATAATAGCTTGGAGATTAGATTCTATTGGGCTGGAAAAGGGACAACTGCTATCCCATTTAAATCAGTATACGGTCCTCTTATATCTGCTATCTCCGTGGAATACATACCAGAAAATGGAATATCTGCTGGAGCTGTCGCAGGAATTGTGGTTGCAGTAGCTGTTATTGTGATCTTGGTATTTGGTATACTCTGGTGGAGAGGCTGTATAGGACACAGAAGTTCATTGGCTAAAGATCTTCAGGGTTTGGATCTTAGAACTGGTATATTCACCTTCAAGGAAATCAAAGCAGCAACCAACAACTTTAATATAGCTAATAAAATCGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGTACCCTCCCAAATGGCACAATAATTGCAGTTAAGCAGCTATCTGCCAAATCAAAGCAAGGGAACCGTGAATTTGTTAATGAAATAGGCATGATTTCAGCTTTGCAGCATCCCTATCTTGTTAAGCTCTATGGCTGTTGTGTTGAAGGTGATCAATTGTTGTTGATATATGAGTTCATGGAGAACAATAGTCTTGCAAGTGCCTTATTTGGTTCAAAAGAATTGGGATTAAAATTAGATTGGCCAATAAGACACAAGATTTGTGTTGGGATCGCTAGTGGTTTGGCATACCTCCATGAAGAATCAAGATTGAAGATTGTCCATAGAGACATTAAGGCTACTAATGTGCTACTTGATAAAGATTTGAACCCCAAGATATCAGATTTTGGTTTGGCCAAGCTTGTTGAAGAGGACAATACGCACATAAGCACTCGAATTGCTGGCACTTATGGATATATGGCACCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCAGACATCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTGAGTGGAAGGGTCAACACCATTCACCGGGCAAAGGAGGAAGCAATCTATCTTCTTGACTGGGCACGTATCTTGAAAGAAAAAGGAGAATTACTAGAGCTAGTTGATCCGAGGTTGGGCTCAAACTTTGACAAGGAGCAAGTAATGGTGATGGTCCAAGTGGCTCTCCTATGTACCAATATAACCCCAGCAGTGAGGCCTACCATGTCTTCAGTGGTGAGCATGCTTGAAGGTAAAAGAGTGGTTGAGGAAATAGTTTCAGAGTCAAGTGAGGCATTGGATGAGAAGAAGTTGGAGGTAATAAGGACGTTATACAAACAGACGGAAGAAAGAAATAATATAACTGAGGTTCAACAAGGTACATCAGTGGACGAACTGTTTGCTGCTTCATCAACGTCAGCATCGGATCTCTACCCTCTTCATTTGGACTCCTCTTACTGGGATAAAAGATAA 1869 0.4072 MGNNSGMPMCLRSNSCLEKSRSLYINCGGDSVIYNEGIKYEGDADKAGPARFYYGGGKWAFSTTGYYMDNDTEYYTCSNQSRLSMTDDDAKLYMNARVTPISLTYYGFCLENGRYRLKLHFAEIMFTDDQTYSSLGRRLFDIYIQGEKVLENFNIAERAGGVGKAIIEPFTTDVSNNSLEIRFYWAGKGTTAIPFKSVYGPLISAISVEYIPENGISAGAVAGIVVAVAVIVILVFGILWWRGCIGHRSSLAKDLQGLDLRTGIFTFKEIKAATNNFNIANKIGEGGFGPVYKGTLPNGTIIAVKQLSAKSKQGNREFVNEIGMISALQHPYLVKLYGCCVEGDQLLLIYEFMENNSLASALFGSKELGLKLDWPIRHKICVGIASGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADIYSFGIVALEIVSGRVNTIHRAKEEAIYLLDWARILKEKGELLELVDPRLGSNFDKEQVMVMVQVALLCTNITPAVRPTMSSVVSMLEGKRVVEEIVSESSEALDEKKLEVIRTLYKQTEERNNITEVQQGTSVDELFAASSTSASDLYPLHLDSSYWDKR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02858 622 SMART serkin_6 277 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02858 622 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 576 - -
Accr1g02858 622 ProSiteProfiles Protein kinase domain profile. 277 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02858 622 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 20 211 - -
Accr1g02858 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 399 411 IPR008271 GO:0004672|GO:0006468
Accr1g02858 622 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 246 352 - -
Accr1g02858 622 Gene3D - 19 210 - -
Accr1g02858 622 Pfam Protein tyrosine and serine/threonine kinase 279 548 IPR001245 GO:0004672|GO:0006468
Accr1g02858 622 CDD STKc_IRAK 283 550 - -
Accr1g02858 622 Gene3D Transferase(Phosphotransferase) domain 1 353 566 - -
Accr1g02858 622 SUPERFAMILY Protein kinase-like (PK-like) 261 553 IPR011009 -
Accr1g02858 622 Gene3D Phosphorylase Kinase; domain 1 247 352 - -
Accr1g02858 622 Pfam Malectin domain 23 206 IPR021720 -
Accr1g02858 622 FunFam Putative LRR receptor-like serine/threonine-protein kinase 353 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02858 Accr-Chr1 65563752 65570070 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02858 10 608 Receptor kinase-like Gene Family AT1G53420 57.143 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02858 PK_Tyr_Ser-Thr 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02858 - - qsa:O6P43_001072 854.358