Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02856 ATGGAGCTTGCCATGTCAAGCTCCAATAAAGCTGTCTCAATGTTCTTCTTTGGATTTCTGCTTCTCAGTTTCTTCACAGATTTTACATCCAACGCTCAACTTATACCCCTACATGAAGTGAAAGCTCTTCAGGCAATATCTGATAAATGCAAGAACGTGAATTGGAAGGTGACACAAAGATCTTGCATTAATGCAAATAAAGGATTTAATAACTTTGTGATTAACATGTCCGTACCCAGTCCTTTCCCTCAAATTGCCAGAAATATCACTTGCGATTGCGCTTTCCAAAGCGGCACCGTTTGCCACGTCACTAACATAATGTTGAGAGGCTTGAATATATCTGGAGCCATCCCCAATGAATTCGGAGATGTCACCCAGCTGAATATACTCGATCTCACTTATAACTATCTCAATGGCACAATCCCGACGTTTTTTACTCGCATCCCTATTACCAATCTGTCCATTGTGGGGAATCGAATTAGTGGTTCAATTCCTGCAGAATTGGGCGAAATTGCGAGTCTACGGGAGCTGATCTTGGAAGATAATCAGCTTGGAGGACATCTTCCTCAAAGTCTTGGAAATTTGAGCAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACATTTGGAAATCTCAAGAACCTTACTGATTTTAGGATAGATGGGAGCACATTATCAGGGAAGATGCCAAGTTTTATTGGGAACTGGACAGAATTGACTTCTTTGAATATGCAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCCTTGTTGAAAAATTTGAAAGAACTGAGAATTTCTGATTTGAGGGGAACAACAACTATGACATTTCCTGATTTGAAGGATATGGAGAATTTGGAACGACTAGTACTGAGAAATTGCTTAATTACTGGTCCCATTCCAAAGTACATTGGCACAATAAAAAACTTGAGTACTTTAGACCTGAGTTTTAACAAGTTGATTGGCTCAATACCAGACTCATTTCCAGATTTGCGTATAATTAGTCACCTGTTTCTAACAAACAATTATCTGAGTGGAGCAATTCAAGAATGGGTGCTGGAGAACAAAACTAATACTGATTTATCTTACAACAATTTTACTGAGGTTTCTACATCTAGACCTCTTTGCCAGAACTTGCAAGTGAACTTAGCTTCCAGTTTTTCATCTTTACGAAGGATTGAACCCTTTTGTTTGAAGAAGGGCCTACCTTGTCCAAGAACACCTCAGTATAATTCATTGTTCATAAATTGTGGAGGACCCACGATGAAGTTTGGGGGGAATGAATATGAAGAAGATCTCAATCCAAATGGCATTTCATACTTTCATATGGAAACTGACAAATGGGCTTATAGCAGCACAGGGACATATATTTATAATGATAAAGCTGATTATATAGCAAGTTTAGAAAAAAATAAGTTTTCTTTGAATGTCAATGGCTCAGAATACTACCAAACAGCACGTCTTAGCCCTACTTCACTTAAGTACTATGGCCTATGTATGGTGAAGGGTAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGAAGTATAGTAGCCTTGGTACACGCATATTCGATGTTTCTATTCAGGGTTTTAAATACTTGAAAGATTTTGACATTGCTAAGGAAGCTGGTGGAGTTGGTAAGGGCATCACTAAGGAATTTGATGTTGATGTGAATAATAGCACCTTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACATCTATTCCCACTAGAGGTGTATATGGACCTTTAATTTCTGCTATCACTGTGACCCCAAACTCTTCACAAGGGTTCTCTGCTGGAGCTATCGTTGGAATTGTGGTTGGATTATGTGTATTCCTCATACTAGTGGTACTAATTATTGTCCTCCGAAAGAATGGTTTCCTTGGTGGGAAAGATCCTCAAGACATAGATCTTAAGGGTTTGGATCTTACAACCGGTATGTTTACCTTAAAGGAAATCAAAGCAGCAACCAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTTTAAGGGCATTCTCCGAGATGGCAGACTAATTGCAGTTAAGAAGCTATCCGCTAAATCAAGACAAGGGAATCGTGAATTTCTAAATGAAGTAGGCATGATTTTTGCTTTGCATCACCCTTGCCTTGTTAAGCTTTATGGCTGTTGTGTTGAAGGAGATCAATTGTTGCTTGTATACGAGTTCATGGATAACAATAGCCTTGCTCGCGCTTTATTTGGCTCAGAAGAATTTCAGTTAAAATTGGAGTGGCCAACTAGACATAAGATTTGTGTTGGGATTGCTAGAGGTTTGGTTTACCTTCATGAAGAATCAAGATTGAAAATAGTTCATAGAGACATCAAGGCCACTAATGTTTTGCTTGATAAAGATCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAAGAAAATACACACATTAGCACTAGAATTGCTGGAACTCGTGGTTACATGGCCCCTGAATATGCAATGCGTGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGGATTGTTGCTTTGGAAATTATTAGTGGCAAGACCAACACCACTCAAAAGTCAGAAGAAGAATGTTTTTATTTGCGTGATTGGGCACATCAGTTGAAAGATAGAAATCATCTGATGGATCTGGTGGATCCAAAGTTGGGCGAGGACTTTAACAAAGAGGAAATAATGACTGTGATAGATGTGGCTCTCCAATGCACTGAAAACTCGCCAGCACTTAGGCCTACCATGACTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGTTCAGGAGATAGTCTCAGATGATGAAAGTAAGATTATTATGGATGATGACTTGAAATTGACCAAGAAACAAGAAGCTAATAAAGATGAGACTGAGCAGGCCATAAACTCGTCAAGCCATGAGTCACAGACCACATCTAAATCCTTTTCAGATCTCTATTCGGTCAATAAAGATTCTTCTTTCTGGCACAAAACCAACTAG 3063 0.3898 MELAMSSSNKAVSMFFFGFLLLSFFTDFTSNAQLIPLHEVKALQAISDKCKNVNWKVTQRSCINANKGFNNFVINMSVPSPFPQIARNITCDCAFQSGTVCHVTNIMLRGLNISGAIPNEFGDVTQLNILDLTYNYLNGTIPTFFTRIPITNLSIVGNRISGSIPAELGEIASLRELILEDNQLGGHLPQSLGNLSNLRRLLLSANNFTGIIPETFGNLKNLTDFRIDGSTLSGKMPSFIGNWTELTSLNMQGTGMEGPIPSTISLLKNLKELRISDLRGTTTMTFPDLKDMENLERLVLRNCLITGPIPKYIGTIKNLSTLDLSFNKLIGSIPDSFPDLRIISHLFLTNNYLSGAIQEWVLENKTNTDLSYNNFTEVSTSRPLCQNLQVNLASSFSSLRRIEPFCLKKGLPCPRTPQYNSLFINCGGPTMKFGGNEYEEDLNPNGISYFHMETDKWAYSSTGTYIYNDKADYIASLEKNKFSLNVNGSEYYQTARLSPTSLKYYGLCMVKGNYKVKLHFAEIMFSDDQKYSSLGTRIFDVSIQGFKYLKDFDIAKEAGGVGKGITKEFDVDVNNSTLEIHLYWAGKGTTSIPTRGVYGPLISAITVTPNSSQGFSAGAIVGIVVGLCVFLILVVLIIVLRKNGFLGGKDPQDIDLKGLDLTTGMFTLKEIKAATNNFNADNKIGEGGFGPVFKGILRDGRLIAVKKLSAKSRQGNREFLNEVGMIFALHHPCLVKLYGCCVEGDQLLLVYEFMDNNSLARALFGSEEFQLKLEWPTRHKICVGIARGLVYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMRGYLTKKADVYSFGIVALEIISGKTNTTQKSEEECFYLRDWAHQLKDRNHLMDLVDPKLGEDFNKEEIMTVIDVALQCTENSPALRPTMTKVLSILEGRPAVQEIVSDDESKIIMDDDLKLTKKQEANKDETEQAINSSSHESQTTSKSFSDLYSVNKDSSFWHKTN 1020
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02856 1020 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 223 IPR000225 GO:0005515
Accr1g02856 1020 SUPERFAMILY L domain-like 97 376 - -
Accr1g02856 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase 754 961 - -
Accr1g02856 1020 MobiDBLite consensus disorder prediction 985 1003 - -
Accr1g02856 1020 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 212 279 - -
Accr1g02856 1020 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 211 - -
Accr1g02856 1020 Gene3D Phosphorylase Kinase; domain 1 650 753 - -
Accr1g02856 1020 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 990 - -
Accr1g02856 1020 Gene3D Ribonuclease Inhibitor 77 212 IPR032675 -
Accr1g02856 1020 Gene3D Ribonuclease Inhibitor 213 280 IPR032675 -
Accr1g02856 1020 Pfam Leucine rich repeat 173 229 IPR001611 GO:0005515
Accr1g02856 1020 Pfam Leucine rich repeat 294 353 IPR001611 GO:0005515
Accr1g02856 1020 Pfam Protein kinase domain 679 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02856 1020 CDD STKc_IRAK 684 951 - -
Accr1g02856 1020 SMART serkin_6 678 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02856 1020 Gene3D Ribonuclease Inhibitor 281 393 IPR032675 -
Accr1g02856 1020 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 648 753 - -
Accr1g02856 1020 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 419 610 - -
Accr1g02856 1020 Gene3D - 420 611 - -
Accr1g02856 1020 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Accr1g02856 1020 Pfam Malectin domain 421 605 IPR021720 -
Accr1g02856 1020 Gene3D Transferase(Phosphotransferase) domain 1 754 974 - -
Accr1g02856 1020 ProSiteProfiles Protein kinase domain profile. 678 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02856 1020 MobiDBLite consensus disorder prediction 978 1003 - -
Accr1g02856 1020 SUPERFAMILY Protein kinase-like (PK-like) 662 951 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02856 Accr-Chr1 65540447 65550480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02856 15 1015 Receptor kinase-like Gene Family AT1G53440 55.610 0.0 1094
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02856 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02856 - - gmx:100783862 1177.93