Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02855 ATGGAGCTTGCCATGTCAAGCTCCAATAAAGCTGTCTCAATGTTCTTCTTTGGATTTCTGCTTCTCAGTTTCTTCACAGATTTTACATCCAACGCTCAACTTATACCCCTACATGAAGTGAAAGCTCTTCAGGCAATATCTGATAAATGCAAGAACGTGAATTGGAAGGTGACACAAAGATCTTGCATTAATGCAAATAAAGGATTTAATAACTTTGTGATTAACATGTCCGTACCCAGTCCTTTCCCTCAAATTGCCAGAAATATCACTTGCGATTGCGCTTTCCAAAGCGGCACCGTTTGCCACGTCACTAACATAATGTTGAGAGGCTTGAATATATCTGGAGCCATCCCCAATGAATTCGGAGATGTCACCCAGCTGAATATACTCGATCTCACTTATAACTATCTCAATGGCACAATCCCGACGTTTTTTACTCGCATCCCTATTACCAATCTGTCCATTGTGGGGAATCGAATTAGTGGTTCAATTCCTGCAGAATTGGGCGAAATTGCGAGTCTACGGGAGCTGATCTTGGAAGATAATCAGCTTGGAGGACATCTTCCTCAAAGTCTTGGAAATTTGAGCAACTTACGAAGATTACTTCTTTCTGCAAATAATTTTACAGGGATAATACCAGAAACATTTGGAAATCTCAAGAACCTTACTGATTTTAGGATAGATGGGAGCACATTATCAGGGAAGATGCCAAGTTTTATTGGGAACTGGACAGAATTGACTTCTTTGAATATGCAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCCTTGTTGAAAAATTTGAAAGAACTGAGAATTTCTGATTTGAGGGGAACAACAACTATGACATTTCCTGATTTGAAGGATATGGAGAATTTGGAACGACTAGTACTGAGAAATTGCTTAATTACTGGTCCCATTCCAAAGTACATTGGCACAATAAAAAACTTGAGTACTTTAGACCTGAGTTTTAACAAGTTGATTGGCTCAATACCAGACTCATTTCCAGATTTGCGTATAATTAGTCACCTGTTTCTAACAAACAATTATCTGAGTGGAGCAATTCAAGAATGGGTGCTGGAGAACAAAACTAATACTGATTTATCTTACAACAATTTTACTGAGGTTTCTACATCTAGACCTCTTTGCCAGAACTTGCAAGTGAACTTAGCTTCCAGTTTTTCATCTTTACGAAGGATTGAACCCTTTTGTTTGAAGAAGGGCCTACCTTGTCCAAGAACACCTCAGTATAATTCATTGTTCATAAATTGTGGAGGACCCACGATGAAGTTTGGGGGGAATGAATATGAAGAAGATCTCAATCCAAATGGCATTTCATACTTTCATATGGAAACTGACAAATGGGCTTATAGCAGCACAGGGACATATATTTATAATGATAAAGCTGATTATATAGCAAGTTTAGAAAAAAATAAGTTTTCTTTGAATGTCAATGGCTCAGAATACTACCAAACAGCACGTCTTAGCCCTACTTCACTTAAGTACTATGGCCTATGTATGGTGAAGGGTAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGAAGTATAGTAGCCTTGGTACACGCATATTCGATGTTTCTATTCAGGGTTTTAAATACTTGAAAGATTTTGACATTGCTAAGGAAGCTGGTGGAGTTGGGAAAGGAACTACATCTATTCCCACTAGAGGTGTATATGGACCTTTAATTTCTGCTATCACTGTGACCCCAAACTCTTCACAAGGGTTCTCTGCTGGAGCTATCGTTGGAATTGTGGTTGGATTATGTGTATTCCTCATACTAGTGGTACTAATTATTGTCCTCCGAAAGAATGGTTTCCTTGGTGGGAAAGATCCTCAAGACATAGATCTTAAGGGTTTGGATCTTACAACCGGTATGTTTACCTTAAAGGAAATCAAAGCAGCAACCAACAACTTCAATGCTGATAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTTTAAGGGCATTCTCCGAGATGGCAGACTAATTGCAGTTAAGAAGCTATCCGCTAAATCAAGACAAGGGAATCGTGAATTTCTAAATGAAGTAGGCATGATTTTTGCTTTGCATCACCCTTGCCTTGTTAAGCTTTATGGCTGTTGTGTTGAAGGAGATCAATTGTTGCTTGTATACGAGTTCATGGATAACAATAGCCTTGCTCGCGCTTTATTTGGCTCAGAAGAATTTCAGTTAAAATTGGAGTGGCCAACTAGACATAAGATTTGTGTTGGGATTGCTAGAGATCTCAACCCCAAGATATCTGATTTTGGTTTGGCCAAGCTTTATGAGGAAGAAAATACACACATTAGCACTAGAATTGCTGGAACTCGTGGTTACATGGCCCCTGAATATGCAATGCGTGGATATTTGACTAAGAAAGCAGATGTTTATAGTTTTGGGATTGTTGCTTTGGAAATTATTAGTGGCAAGACCAACACCACTCAAAAGTCAGAAGAAGAATGTTTTTATTTGCGTGATTGGGCACATCAGTTGAAAGATAGAAATCATCTGATGGATCTGGTGGATCCAAAGTTGGGCGAGGACTTTAACAAAGAGGAAATAATGACTGTGATAGATGTGGCTCTCCAATGCACTGAAAACTCGCCAGCACTTAGGCCTACCATGACTAAAGTGCTTAGCATTCTTGAAGGCAGGCCTGCTGTTCAGGAGATAGTCTCAGATGATGAAAGTAAGATTATTATGGATGATGACTTGAAATTGACCAAGAAACAAGAAGCTAATAAAGATGAGACTGAGCAGGCCATAAACTCGTCAAGCCATGAGTCACAGACCACATCTAAATCCTTTTCAGATCTCTATTCGGTCAATAAAGATTCTTCTTTCTGGCACAAAACCAACTAG 2910 0.3918 MELAMSSSNKAVSMFFFGFLLLSFFTDFTSNAQLIPLHEVKALQAISDKCKNVNWKVTQRSCINANKGFNNFVINMSVPSPFPQIARNITCDCAFQSGTVCHVTNIMLRGLNISGAIPNEFGDVTQLNILDLTYNYLNGTIPTFFTRIPITNLSIVGNRISGSIPAELGEIASLRELILEDNQLGGHLPQSLGNLSNLRRLLLSANNFTGIIPETFGNLKNLTDFRIDGSTLSGKMPSFIGNWTELTSLNMQGTGMEGPIPSTISLLKNLKELRISDLRGTTTMTFPDLKDMENLERLVLRNCLITGPIPKYIGTIKNLSTLDLSFNKLIGSIPDSFPDLRIISHLFLTNNYLSGAIQEWVLENKTNTDLSYNNFTEVSTSRPLCQNLQVNLASSFSSLRRIEPFCLKKGLPCPRTPQYNSLFINCGGPTMKFGGNEYEEDLNPNGISYFHMETDKWAYSSTGTYIYNDKADYIASLEKNKFSLNVNGSEYYQTARLSPTSLKYYGLCMVKGNYKVKLHFAEIMFSDDQKYSSLGTRIFDVSIQGFKYLKDFDIAKEAGGVGKGTTSIPTRGVYGPLISAITVTPNSSQGFSAGAIVGIVVGLCVFLILVVLIIVLRKNGFLGGKDPQDIDLKGLDLTTGMFTLKEIKAATNNFNADNKIGEGGFGPVFKGILRDGRLIAVKKLSAKSRQGNREFLNEVGMIFALHHPCLVKLYGCCVEGDQLLLVYEFMDNNSLARALFGSEEFQLKLEWPTRHKICVGIARDLNPKISDFGLAKLYEEENTHISTRIAGTRGYMAPEYAMRGYLTKKADVYSFGIVALEIISGKTNTTQKSEEECFYLRDWAHQLKDRNHLMDLVDPKLGEDFNKEEIMTVIDVALQCTENSPALRPTMTKVLSILEGRPAVQEIVSDDESKIIMDDDLKLTKKQEANKDETEQAINSSSHESQTTSKSFSDLYSVNKDSSFWHKTN 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02855 969 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 193 223 IPR000225 GO:0005515
Accr1g02855 969 Gene3D Transferase(Phosphotransferase) domain 1 759 923 - -
Accr1g02855 969 Pfam Protein kinase domain 764 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02855 969 Gene3D - 420 587 - -
Accr1g02855 969 MobiDBLite consensus disorder prediction 927 952 - -
Accr1g02855 969 Gene3D Ribonuclease Inhibitor 179 281 IPR032675 -
Accr1g02855 969 Gene3D Ribonuclease Inhibitor 282 391 IPR032675 -
Accr1g02855 969 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 39 211 - -
Accr1g02855 969 ProSiteProfiles Protein kinase domain profile. 654 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02855 969 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 624 729 - -
Accr1g02855 969 Gene3D Phosphorylase Kinase; domain 1 626 729 - -
Accr1g02855 969 Pfam Malectin domain 421 562 IPR021720 -
Accr1g02855 969 Gene3D Ribonuclease Inhibitor 54 173 IPR032675 -
Accr1g02855 969 Pfam Leucine rich repeat 294 353 IPR001611 GO:0005515
Accr1g02855 969 Pfam Leucine rich repeat 173 229 IPR001611 GO:0005515
Accr1g02855 969 SUPERFAMILY L domain-like 93 391 - -
Accr1g02855 969 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 22 765 - -
Accr1g02855 969 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 212 279 - -
Accr1g02855 969 MobiDBLite consensus disorder prediction 934 952 - -
Accr1g02855 969 Pfam Protein tyrosine and serine/threonine kinase 656 763 IPR001245 GO:0004672|GO:0006468
Accr1g02855 969 SUPERFAMILY Protein kinase-like (PK-like) 638 900 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02855 Accr-Chr1 65540447 65550480 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02855 15 964 Receptor kinase-like Gene Family AT1G53440 51.772 0.0 990
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02855 Malectin 6.9e-26 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02855 - - qsa:O6P43_029226 1088.17