LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr1g02854	ATGGATATGGAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCGTTGCTGACAAATTTGAAAGAATTGAGAATATCTGATTTGAAAGGAACAACAACTATGGCATTTCCTAATCTGAAGAATTTGAAGAGTTTGGAACGGCTGATATTAAGGAATTGCTTCATTACTGGTCCCATTCCAATATATATTGGTGAAATGACAAACTTAAAGACTTTTGACCTAAGCTTTAACATGTTGGCTGGCTCAATCCCTGAATCATTTCGGAACTTGAATCTTATTAATCACATGTTTCTGAATAACAATTCTCTGAGTGGGGCAATTCCAGAATGGGTGCTACAGAATCAATATAATATTGATTTATCTTACAACAATTTTACTGAGGCTTCTACATCTAGTTGCCAGAGCTTACAAGTGAACTTAGCTTCCAGCCTTTCATCTTCAAATAGAAATGTAACCTTTTGTCTGAAGAAGGGCCTAACTTGTCCAGGAAAACCCCAGTATTATTCATTGTACATAAATTCTGGAGGACCCAAGATGGAGTTTGAGGGGAATGAATATGAAGAAGATCTTAATCAAAATGGCATTTCATACTTTTATATAAAAGATGACAAATGGGCCTATAGCAGCACAGGAACATACATATATAATGATAAAGCTAATTATGTAGCCAGTCTACAAACAAATAAGTTTTCTTTGAATGTCGATGGCTCAGAATACTACCAAACAGCGCGGCTCAGCCCTCAATCGCTTAAGTACTATGGCCTATGTATGATGAAAGGTAGCTATAAAGTAAAGCTGCATTTTGCTGAGATAATGTTTTCTGATGACCAAACCTTTAACAATCTTGGAACTCGCATATTCGATGTTTCAATTCAAGGTTTTAAATACATGAAAGATTTTAACATTGCGAAAGAAGCTGGTGGAGCTGGTAAGGGCATCACTAAGGTATTTGATGTTGATGTGAATGATACTACCCTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACGGCGATTCCCACTAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAGGTTCCTTCAAAAGGGCGGTCTATTGGAGTTATTGTTGGAATTGTGGTTGGATCAAGTGCCTTCCTTGTACTTGTGTTCATTGCCCTCAAAAAAATAGGTTTCCTTGGTGGGAAAGGTCCAGAAGACAAGGAACTTTTAGAGCTGAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACTGCAACCAATGACTTCGACCCTACAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTACAAGGGTGTGTTGTCTGATGGTGTTGCTGTTGCAATTAAGCAACTCTCTTCCAAGTCAAGGCAAGGAAATCGGGAATTTGTTAATGAAATAGGAATGATATCTGCTCTGCAACATCCAAATCTTGTGAAACTTTATGGTTGTTGCATTGAAGGAAATCAATTGTTGCTTATATATGAATACATGGAGAACAATTGTCTTGCCCGGGCACTATTTGGCTATGATAAGCAAGGGTTACACTTGGACTGGCCCACAAGAGTGAAAATTTGTCAAGGGATAGCGAGGGGATTGTCTTATCTTCATGAGGAGTCAAGGTTGAAGATAGTACATAGGGACATTAAGGCAACAAACATCTTACTTGATAAAGATCTGAATGCCAAAATCTCTGATTTTGGCTTAGCAAAGCTTGATGAACAAGATAATACCCACATCATCACTCGAGTTGCTGGAACAATTGGCTACATGGCTCCTGAATATGCAATGAGAGGTTACTTGACGGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTCAGTGGAAAGAGCAACGCTAATTGCATACCAATGGACGACTTTGTTCATCTCCTTGATTGGGCCTATGTTCTCCATGAGCAAGGAAAGCTTCTAGAACTGGTGGATCCACGTCTTGGTTCAAGTTACTCCCAACCTGAGGCAATGAGAATGCTAAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACACTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGAGGGAAAAGCTCCAATTCAAGCACCAATAAACAAGCACAAAGATCAAGATGCAAGGTTCAAAGCTTTTGAGATGCTTTCATATGACAGCCAGACATCTATAACCCCTCAGTCTCAAACAAGTATGGAACAAAGAGATAAGTCAATGGATGGGCCATGGGTTGACTCCTCAATATCTCTTTCAAGTAAGGATGATTTTTCTTCATCTAGTAAGCCTCTTGAAGATTGA	2322	0.3949	MDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMAFPNLKNLKSLERLILRNCFITGPIPIYIGEMTNLKTFDLSFNMLAGSIPESFRNLNLINHMFLNNNSLSGAIPEWVLQNQYNIDLSYNNFTEASTSSCQSLQVNLASSLSSSNRNVTFCLKKGLTCPGKPQYYSLYINSGGPKMEFEGNEYEEDLNQNGISYFYIKDDKWAYSSTGTYIYNDKANYVASLQTNKFSLNVDGSEYYQTARLSPQSLKYYGLCMMKGSYKVKLHFAEIMFSDDQTFNNLGTRIFDVSIQGFKYMKDFNIAKEAGGAGKGITKVFDVDVNDTTLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKVPSKGRSIGVIVGIVVGSSAFLVLVFIALKKIGFLGGKGPEDKELLELKTGYFSLRQIKTATNDFDPTNKIGEGGFGPVYKGVLSDGVAVAIKQLSSKSRQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGYDKQGLHLDWPTRVKICQGIARGLSYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEQDNTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNANCIPMDDFVHLLDWAYVLHEQGKLLELVDPRLGSSYSQPEAMRMLNLALLCTNLSPTLRPSMSSVVSMLEGKAPIQAPINKHKDQDARFKAFEMLSYDSQTSITPQSQTSMEQRDKSMDGPWVDSSISLSSKDDFSSSSKPLED	773

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr1g02854	773	CDD	STKc_IRAK	433	700	-	-
	Accr1g02854	773	SMART	serkin_6	427	698	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g02854	773	ProSiteProfiles	Protein kinase domain profile.	427	704	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Accr1g02854	773	MobiDBLite	consensus disorder prediction	729	773	-	-
	Accr1g02854	773	Gene3D	Ribonuclease Inhibitor	1	169	IPR032675	-
	Accr1g02854	773	Pfam	Malectin domain	171	355	IPR021720	-
	Accr1g02854	773	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	549	561	IPR008271	GO:0004672\|GO:0006468
	Accr1g02854	773	PANTHER	LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED	2	735	-	-
	Accr1g02854	773	FunFam	Putative leucine-rich repeat receptor-like serine/threonine-protein kinase	169	360	-	-
	Accr1g02854	773	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	503	710	-	-
	Accr1g02854	773	SUPERFAMILY	L domain-like	2	143	-	-
	Accr1g02854	773	FunFam	probable LRR receptor-like serine/threonine-protein kinase At1g53430	400	502	-	-
	Accr1g02854	773	SUPERFAMILY	Protein kinase-like (PK-like)	412	732	IPR011009	-
	Accr1g02854	773	MobiDBLite	consensus disorder prediction	729	744	-	-
	Accr1g02854	773	Gene3D	Phosphorylase Kinase; domain 1	400	502	-	-
	Accr1g02854	773	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	38	130	-	-
	Accr1g02854	773	Gene3D	-	170	360	-	-
	Accr1g02854	773	Pfam	Protein tyrosine and serine/threonine kinase	431	698	IPR001245	GO:0004672\|GO:0006468
	Accr1g02854	773	Gene3D	Transferase(Phosphotransferase) domain 1	503	723	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Accr1g02854	Accr-Chr1	65535107	65539601	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr1g02854	1	762	Receptor kinase-like Gene Family	AT1G53440	63.918	0.0	992

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Accr1g02854		PK_Tyr_Ser-Thr	2.5e-50	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr1g02854	-		-	gmx:121173337	1057.74