Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr1g02853 ATGGAATTTGCCATTTCAAGCTCTATACCTTTGTCTGTATTTCTCTTTGGATTTCTTTTGCTAAGTTTCTTCACAGGTCTTCCTTCAAAAGCTCAACTTATACCCCGAGAAGAAGTGGAGGCTTTACAGGCAATATCTGATAAGCTCACAAATGTGAAGTGGAAGGTGACTCCAACATCTTGTATTAAAGGAGATGGCTTTAATAACCTCTTTACTTCACTCCCTGGAGTAAACAGGAATGTCACTTGCAATTGCACTTTCCAAAACGGCACCGTTTGCCATGTCACTAATATACTCTTGAAAAGCCAAAATGTAGCAGGAGAAATACCCAGTGAATTTGGAAATCTCACCCATTTGACTGAACTTGATCTTTATCTCAACTATCTCAATGGCACTATTCCAACGTCTTTTAGGCACATCCCTCTTGTCACTGTGTCCCTTGCAGGGAATCGAATTTGTGGTTCAATTCCCACAGAATTGGGTGAAGTTGCTACTCTGAAGGATCTGGTCCTTGAAGATAATTTGTTTGGAGGACCTCTTCCTCATAGTCTTGGAAATTTGACCAACTTACGGAGAATACGCCTTTCTGCAAATAACTTTACTGGAACAATACCAGAAACGTATGGGAATCTGAAGAACCTGATTGATTTTTCTATAGATGGGAGTACCTTATCAGGAAAGATACCAAATTTTATTGGGAACTGGACCGAACTTCTCTATATGGATATGGAGGGCACAGGCATGGAAGGCCCAATTCCTTCCACCATATCGTTGCTGACAAATTTGAAAGAATTGAGAATATCTGATTTGAAAGGAACAACAACTATGGCATTTCCTAATCTGAAGAATTTGAAGAGTTTGGAACGGCTGATATTAAGGAATTGCTTCATTACTGGTCCCATTCCAATATATATTGGTGAAATGACAAACTTAAAGACTTTTGACCTAAGCTTTAACATGTTGGCTGGCTCAATCCCTGAATCATTTCGGAACTTGAATCTTATTAATCACATGTTTCTGAATAACAATTCTCTGAGTGGGGCAATTCCAGAATGGGTGCTACAGAATCAATATAATATTGATTTATCTTACAACAATTTTACTGAGGCTTCTACATCTAGTTGCCAGAGCTTACAAGTGAACTTAGCTTCCAGCCTTTCATCTTCAAATAGAAATGTAACCTTTTGTCTGAAGAAGGGCCTAACTTGTCCAGGAAAACCCCAGTATTATTCATTGTACATAAATTCTGGAGGACCCAAGATGGAGTTTGAGGGGAATGAATATGAAGAAGATCTTAATCAAAATGGCATTTCATACTTTTATATAAAAGATGACAAATGGGCCTATAGCAGCACAGGAACATACATATATAATGATAAAGCTAATTATGTAGCCAGTCTACAAACAAATAAGTTTTCTTTGAATGTCGATGGCTCAGAATACTACCAAACAGCGCGGCTCAGCCCTCAATCGCTTAAGTACTATGGCCTATGTATGATGAAAGGTAGCTATAAAGTAAAGCTGCATTTTGCTGAGATAATGTTTTCTGATGACCAAACCTTTAACAATCTTGGAACTCGCATATTCGATGTTTCAATTCAAGGTTTTAAATACATGAAAGATTTTAACATTGCGAAAGAAGCTGGTGGAGCTGGTAAGGGCATCACTAAGGTATTTGATGTTGATGTGAATGATACTACCCTGGAGATTCATTTATATTGGGCAGGGAAAGGAACTACGGCGATTCCCACTAGAGGTGTATATGGACCTCTAATATCTGCCATCACTGTGACCCCAAACTTCAAGGTTCCTTCAAAAGGGCGGTCTATTGGAGTTATTGTTGGAATTGTGGTTGGATCAAGTGCCTTCCTTGTACTTGTGTTCATTGCCCTCAAAAAAATAGGTTTCCTTGGTGGGAAAGGTCCAGAAGACAAGGAACTTTTAGAGCTGAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACTGCAACCAATGACTTCGACCCTACAAATAAGATAGGAGAAGGTGGCTTTGGGCCTGTGTACAAGGGTGTGTTGTCTGATGGTGTTGCTGTTGCAATTAAGCAACTCTCTTCCAAGTCAAGGCAAGGAAATCGGGAATTTGTTAATGAAATAGGAATGATATCTGCTCTGCAACATCCAAATCTTGTGAAACTTTATGGTTGTTGCATTGAAGGAAATCAATTGTTGCTTATATATGAATACATGGAGAACAATTGTCTTGCCCGGGCACTATTTGGCTATGATAAGCAAGGGTTACACTTGGACTGGCCCACAAGAGTGAAAATTTGTCAAGGGATAGCGAGGGGATTGTCTTATCTTCATGAGGAGTCAAGGTTGAAGATAGTACATAGGGACATTAAGGCAACAAACATCTTACTTGATAAAGATCTGAATGCCAAAATCTCTGATTTTGGCTTAGCAAAGCTTGATGAACAAGATAATACCCACATCATCACTCGAGTTGCTGGAACAATTGGCTACATGGCTCCTGAATATGCAATGAGAGGTTACTTGACGGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTCAGTGGAAAGAGCAACGCTAATTGCATACCAATGGACGACTTTGTTCATCTCCTTGATTGGGCCTATGTTCTCCATGAGCAAGGAAAGCTTCTAGAACTGGTGGATCCACGTCTTGGTTCAAGTTACTCCCAACCTGAGGCAATGAGAATGCTAAATTTGGCTCTTTTGTGCACTAATCTATCTCCCACACTCAGACCCTCCATGTCATCTGTAGTGAGCATGCTTGAGGGAAAAGCTCCAATTCAAGCACCAATAAACAAGCACAAAGATCAAGATGCAAGGTTCAAAGCTTTTGAGATGCTTTCATATGACAGCCAGACATCTATAACCCCTCAGTCTCAAACAAGTATGGAACAAAGAGATAAGTCAATGGATGGGCCATGGGTTGACTCCTCAATATCTCTTTCAAGTAAGGATGATTTTTCTTCATCTAGTAAGCCTCTTGAAGATTGA 3042 0.3958 MEFAISSSIPLSVFLFGFLLLSFFTGLPSKAQLIPREEVEALQAISDKLTNVKWKVTPTSCIKGDGFNNLFTSLPGVNRNVTCNCTFQNGTVCHVTNILLKSQNVAGEIPSEFGNLTHLTELDLYLNYLNGTIPTSFRHIPLVTVSLAGNRICGSIPTELGEVATLKDLVLEDNLFGGPLPHSLGNLTNLRRIRLSANNFTGTIPETYGNLKNLIDFSIDGSTLSGKIPNFIGNWTELLYMDMEGTGMEGPIPSTISLLTNLKELRISDLKGTTTMAFPNLKNLKSLERLILRNCFITGPIPIYIGEMTNLKTFDLSFNMLAGSIPESFRNLNLINHMFLNNNSLSGAIPEWVLQNQYNIDLSYNNFTEASTSSCQSLQVNLASSLSSSNRNVTFCLKKGLTCPGKPQYYSLYINSGGPKMEFEGNEYEEDLNQNGISYFYIKDDKWAYSSTGTYIYNDKANYVASLQTNKFSLNVDGSEYYQTARLSPQSLKYYGLCMMKGSYKVKLHFAEIMFSDDQTFNNLGTRIFDVSIQGFKYMKDFNIAKEAGGAGKGITKVFDVDVNDTTLEIHLYWAGKGTTAIPTRGVYGPLISAITVTPNFKVPSKGRSIGVIVGIVVGSSAFLVLVFIALKKIGFLGGKGPEDKELLELKTGYFSLRQIKTATNDFDPTNKIGEGGFGPVYKGVLSDGVAVAIKQLSSKSRQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNCLARALFGYDKQGLHLDWPTRVKICQGIARGLSYLHEESRLKIVHRDIKATNILLDKDLNAKISDFGLAKLDEQDNTHIITRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNANCIPMDDFVHLLDWAYVLHEQGKLLELVDPRLGSSYSQPEAMRMLNLALLCTNLSPTLRPSMSSVVSMLEGKAPIQAPINKHKDQDARFKAFEMLSYDSQTSITPQSQTSMEQRDKSMDGPWVDSSISLSSKDDFSSSSKPLED 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr1g02853 1013 ProSiteProfiles Protein kinase domain profile. 667 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02853 1013 Gene3D Ribonuclease Inhibitor 38 205 IPR032675 -
Accr1g02853 1013 Gene3D Ribonuclease Inhibitor 273 388 IPR032675 -
Accr1g02853 1013 CDD STKc_IRAK 673 940 - -
Accr1g02853 1013 SMART serkin_6 667 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr1g02853 1013 Gene3D Transferase(Phosphotransferase) domain 1 743 963 - -
Accr1g02853 1013 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 21 975 - -
Accr1g02853 1013 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 600 - -
Accr1g02853 1013 Pfam Protein tyrosine and serine/threonine kinase 671 938 IPR001245 GO:0004672|GO:0006468
Accr1g02853 1013 MobiDBLite consensus disorder prediction 969 1013 - -
Accr1g02853 1013 Gene3D Ribonuclease Inhibitor 206 272 IPR032675 -
Accr1g02853 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Accr1g02853 1013 SUPERFAMILY Protein kinase-like (PK-like) 652 972 IPR011009 -
Accr1g02853 1013 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 370 - -
Accr1g02853 1013 Pfam Malectin domain 411 595 IPR021720 -
Accr1g02853 1013 MobiDBLite consensus disorder prediction 969 984 - -
Accr1g02853 1013 FunFam Putative LRR receptor-like serine/threonine-protein kinase 743 950 - -
Accr1g02853 1013 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 640 742 - -
Accr1g02853 1013 Gene3D Phosphorylase Kinase; domain 1 640 742 - -
Accr1g02853 1013 Gene3D - 409 600 - -
Accr1g02853 1013 SUPERFAMILY L domain-like 84 368 - -
Accr1g02853 1013 ProSitePatterns Serine/Threonine protein kinases active-site signature. 789 801 IPR008271 GO:0004672|GO:0006468
Accr1g02853 1013 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr1g02853 Accr-Chr1 65531563 65539601 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr1g02853 13 1002 Receptor kinase-like Gene Family AT1G53440 60.636 0.0 1208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr1g02853 PK_Tyr_Ser-Thr 4.1e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr1g02853 - - gmx:100817368 1314.67